DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009963
GeneHectd3
Synonyms
Desc.HECT domain containing 3
LocusNM_175244 chr4:116667953-116677882(+)
DB links


Entrez 76608
MGI 1923858
Ensembl ENSMUSG00000046861
Vega OTTMUSG00000009776
Featureprotein-coding
GO(BP)
  •   3 Terms
      cellular protein modification process (GO:0006464)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009843
(v2.0)
Hectd3NM_17524476608
12.956329.187633.62212.09135.365326.154593.7097548.71736.98446.70807
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009963
(v1.0)
Hectd376608
Minor ZGA0.95515
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009843
(v2.0)
Hectd376608
681/531-0.1536358/531-0.6833199/5312.1598581/5311.456837/531-1.7581278/531-1.5279
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009843
(v2.0)
Hectd376608
328/236-0.0377150/236-0.7657184/2363.1775553/2362.547118/236-1.6022162/236-1.1348
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009843
(v2.0)
Hectd376608
87.733218746.92
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009843
(v2.0)
Hectd376608
18.528110018.53
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
30.342923.30698.993633.727772.61866
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
967.404675.035267.271112.17955.8994
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
31.72634.7382625.4283
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
30.96823.072936.1095
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
369.852505.096
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
31.74484.6733639.6037
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
8.32673.599314.83129
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
97.7498171.732
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009963
(v1.0)
Hectd3NM_17524476608
9.753292.19402
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009963
(v1.0)
Hectd3NM_17524476608
6.114143.31619
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009963
(v1.0)
2246C0305B01-3Mm.2009521700064K09Rik76608
U004702NAP002785-002U,F,23.6483.72593.47433.52543.47843.45533.4683
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009963
(v1.0)
1423913_atMm.251420Hectd3NM_175244.376608
197.60000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009963
(v1.0)
A_51_P129720Hectd3NM_17524476608
11P0.940.646P
0009963
(v1.0)
A_51_P138673Hectd3NM_17524476608
11P1.1640.377P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009963
(v1.0)
Hectd376608
240260