DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009986
GeneHerpud2
Synonyms
Desc.HERPUD family member 2
LocusNM_020586 chr9:24912574-24956280(-)
DB links


Entrez 80517
MGI 1915393
Ensembl ENSMUSG00000008429
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009867
(v2.0)
Herpud2NM_02058680517
57.259101.70276.285937.586311.02627.53964.9182384.27514.64226.46861
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009986
(v1.0)
Herpud280517
Maternal RNA0.93235
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009867
(v2.0)
Herpud280517
904/3550.8339716/3550.8941960/3554.98933212/3554.499135/355-1.2608191/355-1.4863
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009867
(v2.0)
Herpud280517
543/1631.2182369/1631.058819/1635.82822262/1635.104511/163-1.742483/163-1.5558
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009867
(v2.0)
Herpud280517
21.11629123.2
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009867
(v2.0)
Herpud280517
3.2098724.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009986
(v1.0)
Herpud2NM_02058680517
105.74152.525727.95217.617123.37564
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009986
(v1.0)
Herpud2FR369328,NM_02058680517
140.87861.849740.453414.64066.05103
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009986
(v1.0)
Herpud2NM_02058680517
110.56220.940257.3067
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009986
(v1.0)
Herpud2NM_02058680517
107.91951.998362.4435
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009986
(v1.0)
Herpud2FR369328,NM_02058680517
67.242372.1986
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009986
(v1.0)
Herpud2NM_02058680517
110.62620.653468.4859
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009986
(v1.0)
Herpud2NM_02058680517
25.87937.3546310.2383
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009986
(v1.0)
Herpud2FR369328,NM_02058680517
10.847513.492
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009986
(v1.0)
Herpud2NM_02058680517
88.420431.0749
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009986
(v1.0)
Herpud2NM_02058680517
137.961218.782
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009986
(v1.0)
8143H3060E05-3Mm.1428435031400M07Rik80517
U030625NAP097816-0015031400M07Rik;TC874929Q9D2D0U,F,24.2833.8233.21343.17353.08863.03393.0994
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009986
(v1.0)
1415981_atMm.142843Herpud2NM_020586.280517
918.5751991.2251043.899.42588.575
0009986
(v1.0)
1439424_x_atMm.142843Herpud2NM_020586.280517
352.925719.15286.32581.658.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009986
(v1.0)
A_51_P1028605031400M07RikNM_02058680517
11P1.0580.672P
0009986
(v1.0)
A_52_P325005031400M07RikNM_02058680517
11P0.7650.227P
Proteome N/A