DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010066
GeneHist1h2bc
SynonymsH2bfs
Desc.histone cluster 1, H2bc
LocusNM_023422 chr13:23776068-23784349(+)
DB links


Entrez 68024
MGI 1915274
Ensembl ENSMUSG00000018102
Vega OTTMUSG00000000566
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Systemic lupus erythematosus (mmu05322)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009947
(v2.0)
Hist1h2bcNM_001290380,NM_02342268024
73.463284.8879105.14428.183917.343517.3891182.335150.23487.263824.9588
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010066
(v1.0)
Hist1h2bc68024
Maternal RNA0.97459
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009947
(v2.0)
Hist1h2bc68024
457/340-0.0859337/340-0.128650/3400.8135298/3401.135365/340-0.3248361/340-0.5111
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009947
(v2.0)
Hist1h2bc68024
184/172-0.4127124/172-0.584148/1721.6912270/1721.966218/172-1.1551135/172-0.9411
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009947
(v2.0)
Hist1h2bc68024
24.68938130.48
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009947
(v2.0)
Hist1h2bc68024
4.9494549.17
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010066
(v1.0)
Hist1h2bcNM_02342268024
64.653828.47548.433116.2273346.247
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010066
(v1.0)
Hist1h2bcFR199146,FR214760,FR281286,NM_001110555_dup1,NM_023422,NM_175664,NM_175665,NM_178196,NM_178198,NM_178200,NM_17820268024
368.84458.06480.101872.42541095.72
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010066
(v1.0)
Hist1h2bcNM_02342268024
67.601526.866331.0673
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010066
(v1.0)
Hist1h2bcNM_02342268024
65.985728.189529.656
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010066
(v1.0)
Hist1h2bcFR199146,FR214760,FR281286,NM_001110555_dup1,NM_023422,NM_175664,NM_175665,NM_178196,NM_178198,NM_178200,NM_17820268024
465.0291151.37
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010066
(v1.0)
Hist1h2bcNM_02342268024
67.640726.498332.5257
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010066
(v1.0)
Hist1h2bcNM_02342268024
7.807756.0127423.7515
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010066
(v1.0)
Hist1h2bcFR199146,FR214760,FR281286,NM_001110555_dup1,NM_023422,NM_175664,NM_175665,NM_178196,NM_178198,NM_178200,NM_17820268024
71.643288.037
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010066
(v1.0)
Hist1h2bcNM_02342268024
10.85151.40291
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010066
(v1.0)
Hist1h2bcNM_02342268024
4.382317.0918
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010066
(v1.0)
1053C0175B11-3Mm.21579H2bfs68024
U014643NAP095877-001H2bfs;Hist1h2bc;TC919937,TC919936,TC919934Q9DB593.01162.88512.61222.59552.04232.27492.9003
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010066
(v1.0)
1452540_a_atMm.390567~Mm.440391~Mm.261672~Mm.261673~Mm.371766~Mm.377880~Mm.277425~Mm.261677~Mm.264645~Mm.471247~Mm.261676Hist1h2bb~Hist1h2be~Hist1h2bf~Hist1h2bg~Hist1h2bj~Hist1h2bl~Hist1h2bm~Hist1h2bn~Hist1h2bp~Hist1h2br~Hist1h2bcNM_175664.2~NM_178194.4,NM_001177653.1~NM_178195.1~NM_178196.3~NM_001097979.2~NM_178199.1~NM_178200.1~NM_178201.1~NM_178202.2~NM_001110555.1~NM_023422.3319178
319179
319180
319181
319183
319185
319186
319187
319188
665622
68024
559.75225.20062.725
0010066
(v1.0)
1418072_atMm.390567~Mm.440391~Mm.261673~Mm.471247~Mm.261676Hist1h2bb~Hist1h2be~Hist1h2bg~Hist1h2br~Hist1h2bcNM_175664.2~NM_178194.4,NM_001177653.1~NM_178196.3~NM_001110555.1~NM_023422.3319178
319179
319181
665622
68024
941.425109.7553.450101.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010066
(v1.0)
A_51_P462311Hist1h2bcNM_02342268024
11P0.8720.478P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010066
(v1.0)
Hist1h2bc68024
343121510