DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010125
GeneHmbox1
Synonyms
Desc.homeobox containing 1
LocusNM_177338 chr14:65441055-65568684(-)
DB links


Entrez 219150
MGI 2445066
Ensembl ENSMUSG00000021972
Vega OTTMUSG00000040027
Featureprotein-coding
GO(BP)
  •   4 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
  •   3 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010007
(v2.0)
Hmbox1NM_177338219150
5.373675.6750514.912523.208723.5031.963348.5026516.244924.71311.69027
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010125
(v1.0)
Hmbox1219150
Major ZGA0.9048
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010007
(v2.0)
Hmbox1219150
573/431-0.1017424/431-0.1395123/4311.7637287/4310.741355/431-0.9003234/431-1.4746
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010007
(v2.0)
Hmbox1219150
270/194-0.0357194/194-0.1156118/1942.8084273/1941.810835/194-0.4028123/194-1.2465
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010007
(v2.0)
Hmbox1219150
49.872813736.4
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010007
(v2.0)
Hmbox1219150
11.13939311.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
5.8994810.259917.259316.26055.92381
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
64.8881164.492103.133258.5971.6271
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
6.168441.965211.1937
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
6.0210110.156812.0159
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
222.248314.958
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
6.172031.9382913.1787
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
15.979515.700217.0904
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
166.394419.844
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010125
(v1.0)
Hmbox1NM_177338219150
9.840247.94764
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010125
(v1.0)
Hmbox1NM_177338219150
0.3453440.0989935
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010125
(v1.0)
1452449_atMm.344074Hmbox1NM_177338.5219150
0062.87564.47531.125
Agilent44K N/A
Proteome N/A