DBTMEE:0010126
| Gene | Hmbs |
| Synonyms | PBGD
porphobilinogen deaminase
Ups
Uros1 |
| Description | hydroxymethylbilane synthase |
| Locus | NM_013551 UCSC: chr9:44144431-44152311(-) OLP: chr9:44144431-44152311(-)
NM_001110251 UCSC: chr9:44144431-44150464(-) OLP: chr9:44144431-44150464(-)
|
| DB links |
Entrez 15288
MGI 96112
Ensembl ENSMUSG00000032126
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
porphyrin-containing compound biosynthetic process (GO:0006779)
heme biosynthetic process (GO:0006783)
peptidyl-pyrromethane cofactor linkage (GO:0018160)
tetrapyrrole biosynthetic process (GO:0033014)
|
| GO_MF |
-
6 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG |
-
2 Terms
|
| Ver2_FPKM |
see DBTMEE:2010008 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0010126
(v1.0) | Hmbs | NM_001110251,NM_013551 | 15288
| 7.89868 | 4.99816 | 21.7964 | 28.2552 | 15.9753 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0010126
(v1.0) | Hmbs | NM_001110251,NM_013551 | 15288
| 8.25879 | 8.87401 | 5.4531 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0010126
(v1.0) | Hmbs | NM_001110251,NM_013551 | 15288
| 8.0614 | 4.94798 | 5.45432 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0010126
(v1.0) | Hmbs | NM_001110251,NM_013551 | 15288
| 8.26359 | 8.75247 | 5.98212 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0010126
(v1.0) | Hmbs | NM_001110251,NM_013551 | 15288
| 20.1801 | 27.2815 | 30.3337 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0010126
(v1.0) | Hmbs | NM_001110251,NM_013551 | 15288
| 0.316775 | 22.1036 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0010126
(v1.0) | Hmbs | NM_001110251,NM_013551 | 15288
| 4.15552 | 1.45613 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0010126
(v1.0) | 2755 | C0359E12-3 | Mm.1710 | Hmbs | 15288
| U030768 | NAP096502-001 | | TC897819,TC897818,TC897817 | P22907 | U,F,2 | 2.8096 | 3.0305 | 3.5775 | 3.8394 | 3.3041 | 3.5077 | 3.5092 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0010126
(v1.0) | 1436930_x_at | Mm.247676 | Hmbs | NM_013551.2,NM_001110251.1 | 15288
| 41.275 | 0 | 237.15 | 289.525 | 346.4 |
0010126
(v1.0) | 1426475_at | Mm.247676 | Hmbs | NM_013551.2,NM_001110251.1 | 15288
| 0 | 0 | 0 | 0 | 375.1 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0010126
(v1.0) | A_51_P155361 | Hmbs | NM_013551 | 15288
| 1 (0.807 to 1.195) | 1 | P | 0.166 (0.144 to 0.19) | 0.00000000000126 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0010126
(v1.0) | Hmbs | 15288
| 1 | 2 | 0 | 2 | 3 | 0 |
|
