DBTMEE:0010129
| Gene | Hmg20b |
| Synonyms | BRAF35
BRCA2-associated factor 35
Hmgx2
Hmgxb2
Smarce1r |
| Description | high mobility group 20B |
| Locus | NM_001163166 UCSC: chr10:80808791-80813202(-) OLP: chr10:80808791-80813202(-)
NM_001163165 UCSC: chr10:80808791-80813171(-) OLP: chr10:80808791-80813171(-)
NM_010440 UCSC: chr10:80808791-80813172(-) OLP: chr10:80808791-80813172(-)
|
| DB links |
Entrez 15353
MGI 1341190
Ensembl ENSMUSG00000020232
Vega OTTMUSG00000017278
|
| Feature | protein-coding |
| GO_BP |
-
 9 Terms
|
| GO_MF |
-
5 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2010012 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0010129
(v1.0) | Hmg20b | NM_001163165,NM_001163166,NM_010440 | 15353
| 18.5619 | 11.8551 | 7.54407 | 9.64124 | 9.68889 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0010129
(v1.0) | Hmg20b | NM_001163165,NM_001163166,NM_010440 | 15353
| 19.4082 | 10.0313 | 12.9341 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0010129
(v1.0) | Hmg20b | NM_001163165,NM_001163166,NM_010440 | 15353
| 18.9443 | 11.736 | 17.4885 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0010129
(v1.0) | Hmg20b | NM_001163165,NM_001163166,NM_010440 | 15353
| 19.4195 | 9.89392 | 19.1808 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0010129
(v1.0) | Hmg20b | NM_001163165,NM_001163166,NM_010440 | 15353
| 6.98463 | 9.309 | 11.5427 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0010129
(v1.0) | Hmg20b | NM_001163165,NM_001163166,NM_010440 | 15353
| 4.48591 | 1.25676 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0010129
(v1.0) | Hmg20b | NM_001163165,NM_001163166,NM_010440 | 15353
| 22.9493 | 11.6509 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0010129
(v1.0) | 21858 | L0920C04-3 | | Hmg20b | 15353
| U032043 | NAP016726-001 | Hmg20b; | TC925734,TC925730,TC925729,TC925728,TC925726 | Q9NSF7 | | 3.6945 | 3.5617 | 3.3422 | 3.8823 | 3.8217 | 3.9891 | 3.8512 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0010129
(v1.0) | 1417637_a_at | Mm.38474 | Hmg20b | NM_010440.3,NM_001163165.1,NM_001163166.1 | 15353
| 29.925 | 37.1 | 36.875 | 37.825 | 39.925 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0010129
(v1.0) | A_52_P358963 | Hmg20b | NM_010440 | 15353
| 1 | 1 | P | 0.456 | 0.0804 | P |
|
| Proteome |
N/A |
