DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010145
GeneHmgn2
SynonymsHMG-17
Hmg17
Desc.high mobility group nucleosomal binding domain 2
LocusNM_016957 chr4:133520654-133523906(-)
DB links


Entrez 15331
MGI 96136
Ensembl ENSMUSG00000003038
Vega OTTMUSG00000009711
Featureprotein-coding
GO(BP)
  •   1 Terms
      regulation of development, heterochronic (GO:0040034)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010028
(v2.0)
Hmgn2NM_01695715331
84.33167.848435.412428.267461.9648310.01158.82016.729482.003416.738
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010145
(v1.0)
Hmgn215331
MGA0.99341
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010028
(v2.0)
Hmgn215331
808/4370.3732451/437-0.0705103/4371.4905245/4370.49413/437-2.92120/437-2.4491
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010028
(v2.0)
Hmgn215331
466/1660.9721214/1660.248995/1662.7092222/1661.73544/166-3.031163/166-1.9715
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010028
(v2.0)
Hmgn215331
67.545115643.3
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010028
(v2.0)
Hmgn215331
14.049410014.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
8.158163.751521.063343.008541.6267
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
69.43376.245587.951511.489673.91556
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
8.5301130.84094.09297
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
8.326233.713835.00101
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
00.0328816
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
8.5350630.41855.48494
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
19.501441.526556.7496
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
0.5583560.883868
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010145
(v1.0)
Hmgn2NM_01695715331
7.7234534.719
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010145
(v1.0)
Hmgn2NM_01695715331
00.308228
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010145
(v1.0)
5044G0120C02-3Mm.911Hmgn215331
U025628NAP097532-001TC903147,TC903143P09602U,F,23.08933.13873.34593.90973.4713.72343.6236
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010145
(v1.0)
1433507_a_atMm.911~Mm.319660Gm10282~Hmgn2~NM_016957.3100042405
15331
114.20302.75929.75793.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010145
(v1.0)
A_52_P149864Hmgn2NM_01695715331
11P0.8070.305P
Proteome N/A