DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010148
GeneHmgxb3
Synonyms
Desc.HMG box domain containing 3
LocusNM_178277 chr18:61290931-61336703(-)
NM_134134 chr18:61290931-61336704(-)
DB links


Entrez 106894
MGI 2441817
Ensembl ENSMUSG00000024622
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010031
(v2.0)
Hmgxb3NM_134134,NM_178277106894
5.5107126.427746.256535.360727.16835.6679618.769453.408322.51525.0247
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010148
(v1.0)
Hmgxb3106894
Minor ZGA0.9126
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010031
(v2.0)
Hmgxb3106894
773/4920.1387473/492-0.1726194/4922.2307431/4921.136326/492-2.142223/492-1.7341
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010031
(v2.0)
Hmgxb3106894
385/2040.4018232/2040.069183/2043.3688411/2042.32775/204-3.058873/204-2.0594
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010031
(v2.0)
Hmgxb3106894
87.068915855.11
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010031
(v2.0)
Hmgxb3106894
23.76569225.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010148
(v1.0)
Hmgxb3NM_134134,NM_178277106894
27.46532.050326.331318.791113.2122
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010148
(v1.0)
Hmgxb3NM_134134,NM_178277106894
28.71722.015334.9675
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010148
(v1.0)
Hmgxb3NM_134134,NM_178277106894
28.030831.728439.5203
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010148
(v1.0)
Hmgxb3NM_134134,NM_178277106894
28.73391.9876943.3446
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010148
(v1.0)
Hmgxb3NM_134134,NM_178277106894
24.378718.143515.5126
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010148
(v1.0)
Hmgxb3FR039059,NM_134134,NM_178277106894
67.499858.4858
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010148
(v1.0)
Hmgxb3NM_134134,NM_178277106894
10.84178.36217
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010148
(v1.0)
Hmgxb3NM_134134,NM_178277106894
12.69086.27251
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010148
(v1.0)
4120C0916E03-3Mm.276202510002C16Rik106894
U038466NAP094991-0012510002C16Rik;TC837588Q9JJ64U,F,24.50944.5264.4044.53614.31794.3614.3266
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010148
(v1.0)
1418044_atMm.27620Hmgxb3NM_178277.1,NM_134134.2106894
212.3269.35261.775184.875145.75
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010148
(v1.0)
A_52_P431965A630042L21RikNM_134134106894
11P2.1460.0827P
Proteome N/A