DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010168
GeneHnrnpab
SynonymsCBF-A
Cgbfa
Hnrpab
Desc.heterogeneous nuclear ribonucleoprotein A/B
LocusNM_010448 chr11:51413602-51420383(-)
NM_001048061 chr11:51413602-51420383(-)
DB links


Entrez 15384
MGI 1330294
Ensembl ENSMUSG00000020358
Vega OTTMUSG00000005602
Featureprotein-coding
GO(BP)
  •   5 Terms
      epithelial to mesenchymal transition (GO:0001837)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010052
(v2.0)
HnrnpabNM_001048061,NM_01044815384
115.9525.805854.6899279.614414.029147.543201.27937.3566437.033181.075
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010168
(v1.0)
Hnrnpab15384
Major ZGA0.99795
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010052
(v2.0)
Hnrnpab15384
746/4380.2549443/438-0.0996355/4383.2626868/4382.311428/438-1.8727195/438-1.7589
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010052
(v2.0)
Hnrnpab15384
416/1660.8089256/1660.5062339/1664.5336790/1663.56219/166-2.031164/166-1.9493
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010052
(v2.0)
Hnrnpab15384
45.513315529.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010052
(v2.0)
Hnrnpab15384
13.87112211.37
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
26.821537.9507208.202287.088143.6
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
56.0644125.988470.465638.001318.712
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
28.044442.398341.405
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
27.374137.569627.6562
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
266.113241.813
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
28.060741.817630.3324
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
192.763277.195302.199
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
523.916595.375
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
23.8108204.857
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010168
(v1.0)
HnrnpabNM_001048061,NM_01044815384
54.795127.5348
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010168
(v1.0)
1539C0225F09-3Mm.24Hnrpab15384
U032739NAP095383-001Hnrpab;TC841582,TC841579Q99020U,F,23.4173.1633.31373.44184.38163.86634.2731
0010168
(v1.0)
2449C0324B02-3Mm.136107Hnrpab15384
U032739NAP091551-1Hnrpab;TC841579Q99020U,F,23.19132.92533.02433.01223.36843.20953.3104
0010168
(v1.0)
18814L0228D06-3Mm.24Hnrpab15384
U032739NAP049810-1Hnrpab;TC934883,TC934882,TC841586,TC841579Q99020U,F,24.15124.16374.62894.98864.39054.6144.3368
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010168
(v1.0)
1415914_atMm.280842HnrnpabNM_001048061.1,NM_010448.315384
587.15702.52787.2254014.3752783.7
0010168
(v1.0)
1426114_atMm.280842HnrnpabNM_001048061.1,NM_010448.315384
139.6482.375398.8813.25525.3
0010168
(v1.0)
1455855_x_atMm.280842HnrnpabNM_001048061.1,NM_010448.315384
1222.81819.44310.9756613.1252883.475
0010168
(v1.0)
1431349_atMm.280842HnrnpabNM_001048061.1,NM_010448.315384
00081.12536.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010168
(v1.0)
A_51_P205953HnrpabNM_01044815384
11P0.9830.894P
0010168
(v1.0)
A_52_P20966HnrpabNM_01044815384
11P0.6060.126P
0010168
(v1.0)
A_52_P313080HnrpabNM_01044815384
11P0.830.313P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010168
(v1.0)
Hnrnpab15384
310310