DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010179
GeneHnrnpu
SynonymsHnrpu
scaffold attachment factor A
Sp120
Desc.heterogeneous nuclear ribonucleoprotein U
LocusNM_016805 chr1:180258431-180267915(-)
DB links


Entrez 51810
MGI 1858195
Ensembl ENSMUSG00000039630
Vega OTTMUSG00000021881
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010065
(v2.0)
HnrnpuNM_01680551810
93.2835137.139150.919181.206400.051217.938119.682128.473338.088224.286
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010179
(v1.0)
Hnrnpu51810
MGA0.99149
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010065
(v2.0)
Hnrnpu51810
858/4020.5798597/4020.4534785/4024.52552711/4024.076424/402-1.9643263/402-1.2068
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010065
(v2.0)
Hnrnpu51810
489/1381.3061279/1380.8946645/1385.70631648/1384.88417/138-2.093679/138-1.3871
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010065
(v2.0)
Hnrnpu51810
56.039118829.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010065
(v2.0)
Hnrnpu51810
8.93911346.67
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010179
(v1.0)
HnrnpuNM_01680551810
142.495104.4134.904277.52484.4486
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010179
(v1.0)
HnrnpuFR035247,FR053120,FR257254,FR320149,NM_01680551810
1202.03988.1491426.852672.41684.462
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010179
(v1.0)
HnrnpuNM_01680551810
148.99234.1147113.902
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010179
(v1.0)
HnrnpuNM_01680551810
145.431103.35195.1959
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010179
(v1.0)
HnrnpuFR035247,FR257254,FR320149,NM_01680551810
340.961197.223
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010179
(v1.0)
HnrnpuNM_01680551810
149.07933.6475104.408
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010179
(v1.0)
HnrnpuNM_01680551810
124.9267.96233.627
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010179
(v1.0)
HnrnpuFR035247,FR053120,FR257254,FR320149,NM_01680551810
391.262327.898
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010179
(v1.0)
HnrnpuNM_01680551810
212.739104.293
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010179
(v1.0)
HnrnpuNM_01680551810
24.849751.4585
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010179
(v1.0)
674C0127D05-3Mm.2115Hnrpu51810
2.20462.09931.97242.29282.37332.33672.3843
0010179
(v1.0)
15673K0223C06-3Mm.2115Hnrpu51810
Hnrpu3.93084.21954.46963.93534.09254.44454.1893
0010179
(v1.0)
18954L0238B10-3Mm.2115Hnrpu51810
Hnrpu2.82452.93663.00522.93093.31463.10873.1575
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010179
(v1.0)
1423050_s_atMm.86589HnrnpuNM_016805.251810
1297.8751239.675976.4751417.451468.2
0010179
(v1.0)
1434390_atMm.86589HnrnpuNM_016805.251810
0039.300
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010179
(v1.0)
A_51_P324393HnrpuNM_01680551810
11P0.6620.151P
0010179
(v1.0)
A_52_P73369HnrpuBC01835351810
11P0.5820.127P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010179
(v1.0)
Hnrnpu51810
210210