DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010185
GeneHomer1
SynonymsPSD-Zip45
Ves-1
Desc.homer homolog 1 (Drosophila)
LocusNM_011982 chr13:94074450-94126785(+)
NM_147176 chr13:94074450-94174917(+)
NM_152134 chr13:94077989-94174917(+)
DB links


Entrez 26556
MGI 1347345
Ensembl ENSMUSG00000007617
Vega OTTMUSG00000016339
Featureprotein-coding
GO(BP)
  •   11 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010069
(v2.0)
Homer1NM_001284189,NM_011982,NM_147176,NM_15213426556
2.4922514.234124.027223.550517.12784.607456.7017916.899114.44143.95921
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010185
(v1.0)
Homer126556
Minor ZGA0.90315
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010069
(v2.0)
Homer126556
722/3820.4047533/3820.3635169/3822.3879479/3821.6513105/3820.1926458/382-0.3366
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010069
(v2.0)
Homer126556
396/1400.9822250/1400.7163156/1403.6465407/1402.848752/1400.6141239/1400.1711
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010069
(v2.0)
Homer126556
56.982619828.78
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010069
(v2.0)
Homer126556
15.667415510.11
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
15.204617.036418.011312.24414.89839
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
18.99719.097320.871914.69225.8992
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
15.89780.93823118.5871
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
15.517816.865412.8234
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
19.396415.0776
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
15.9070.92538114.0643
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
16.675611.822210.4244
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
14.533412.8643
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
7.5041211.711
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010185
(v1.0)
Homer1NM_011982,NM_147176,NM_15213426556
2.882294.20261
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010185
(v1.0)
12630H3148H05-5Homer126556
U015115NAP010992-001Homer1;TC816086Q9Z0E9U,F,22.7222.53072.75452.54892.55152.65352.5501
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010185
(v1.0)
1421768_a_atMm.37533Homer1NM_147176.2,NM_152134.2,NM_011982.226556
25.97556.459.27500
0010185
(v1.0)
1425671_atMm.37533Homer1NM_147176.2,NM_152134.2,NM_011982.226556
20.57537.47534.37500
0010185
(v1.0)
1437363_atMm.37533Homer1NM_147176.2,NM_152134.2,NM_011982.226556
0000364.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010185
(v1.0)
A_51_P387159Homer1NM_01198226556
11P2.8170.0627P
0010185
(v1.0)
A_51_P387160Homer1NM_01198226556
11P0.01*0.0183P
Proteome N/A