DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0010392

Gene

Ica1

Synonyms

69kDa
ICA69

Description

islet cell autoantigen 1

Locus

NM_001252266 UCSC: chr6:8580527-8708458(-) OLP: chr6:8580527-8708458(-)
NM_010492 UCSC: chr6:8580527-8728484(-) OLP: chr6:8580527-8728484(-)

DB links

Entrez 15893
MGI 96391
Ensembl ENSMUSG00000062995
Vega OTTMUSG00000023181

Feature

protein-coding

GO_BP

4 Terms

GO_MF

1 Terms

GO_CC

14 Terms

KEGG

1 Terms

see DBTMEE:2010281 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0010392 (v1.0)	Ica1	NM_010492	15893	64.7048	97.7062	21.0451	4.66596	5.12775

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0010392 (v1.0)	Ica1	NM_010492	15893	67.6548	2.45453	106.6

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0010392 (v1.0)	Ica1	NM_010492	15893	66.0378	96.7251	82.0621

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0010392 (v1.0)	Ica1	NM_010492	15893	67.6941	2.42092	90.0029

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0010392 (v1.0)	Ica1	NM_010492	15893	19.4845	4.50517	5.65246

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0010392 (v1.0)	Ica1	NM_010492	15893	25.9583	0.717991

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0010392 (v1.0)	Ica1	NM_010492	15893	51.998	44.1678

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0010392 (v1.0)	4402	C0932F05-3	Mm.3545	Ica1	15893	U027039	NAP004317-001	Ica1;	TC876206,TC856604	P97411	U,F,2	3.6315	3.7823	3.3039	3.0929	2.365	2.4207	2.3536

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0010392 (v1.0)	1417901_a_at	Mm.275683	Ica1	NM_010492.3	15893	489.775	744.525	356.775	0	0
0010392 (v1.0)	1431644_a_at	Mm.275683	Ica1	NM_010492.3	15893	92.65	128.875	73.55	0	0

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0010392 (v1.0)	A_51_P292116	Ica1	NM_010492	15893	1	1	P	0.798	0.265	P
0010392 (v1.0)	A_52_P260339	Ica1	NM_010492	15893	1	1	P	0.329	0.111	P
0010392 (v1.0)	A_52_P409760	Ica1	NM_010492	15893	1	1	P	0.964	0.798	P

N/A