DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010410
GeneIdh3a
Synonyms
Desc.isocitrate dehydrogenase 3 (NAD+) alpha
LocusNM_029573 chr9:54434318-54452469(+)
DB links


Entrez 67834
MGI 1915084
Ensembl ENSMUSG00000032279
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010301
(v2.0)
Idh3aNM_02957367834
11.417335.661548.85729.326228.6317135.560229.062437.63548.3470643.6047
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010410
(v1.0)
Idh3a67834
Minor ZGA0.97715
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010301
(v2.0)
Idh3a67834
625/4120.0882457/4120.0333101/4121.5451150/412-0.125636/412-1.4338246/412-1.338
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010301
(v2.0)
Idh3a67834
320/1860.2686200/186-0.011497/1862.5854134/1860.849613/186-1.70669/186-2.0064
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010301
(v2.0)
Idh3a67834
42.912110042.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010301
(v2.0)
Idh3a67834
17.14367323.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
37.052133.79936.947595.9846520.6767
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
189.92533.3258.8739614.804139.0758
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
38.74144.1754136.8758
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
37.815433.4627.8622
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
377.563348.214
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
38.76394.1182230.5583
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
6.432385.778425.78871
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
7.299557.20044
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010410
(v1.0)
Idh3aNM_02957367834
12.22731.6199
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010410
(v1.0)
Idh3aNM_02957367834
8.6077410.7476
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010410
(v1.0)
7529H3049E07-3Mm.196043Idh3a67834
U010509NAP094554-001Idh3a;TC897416,TC897415,TC854204Q9D1L1U,F,23.3073.28343.14633.0763.12313.18433.3471
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010410
(v1.0)
1432016_a_atMm.279195Idh3aNM_029573.267834
857.3500.55343.2300.8751780.4
0010410
(v1.0)
1422500_atMm.279195Idh3aNM_029573.267834
38.543.07546.5500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010410
(v1.0)
A_51_P268559Idh3aNM_02957367834
11P0.7090.181P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010410
(v1.0)
Idh3a67834
151712455751