DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010411
GeneIdh3b
Synonyms
Desc.isocitrate dehydrogenase 3 (NAD+) beta
LocusNM_130884 chr2:130105045-130110187(-)
DB links


Entrez 170718
MGI 2158650
Ensembl ENSMUSG00000027406
Vega OTTMUSG00000015521
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010302
(v2.0)
Idh3bNM_130884170718
51.32998.647885.7518827.6786.7107174.55445.77835.790985.1712175.173
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010411
(v1.0)
Idh3b170718
MGA0.95723
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010302
(v2.0)
Idh3b170718
665/486-0.0603434/486-0.2788101/4861.3131243/4860.329871/486-0.7094572/486-0.3634
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010302
(v2.0)
Idh3b170718
313/1610.4439196/1610.166695/1612.7503229/1611.823521/161-0.8505123/161-0.979
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010302
(v2.0)
Idh3b170718
76.329113158.27
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010302
(v2.0)
Idh3b170718
20.82097129.33
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
8.992413.9986720.593260.217732.6618
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
74.570132.4755265.517608.573388.516
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
9.4023918.77194.36263
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
9.177663.958524.30654
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
18.526147.7279
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
9.4078518.51484.72327
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
19.066158.142659.0556
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
131.227146.652
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010411
(v1.0)
Idh3bNM_130884170718
8.2844815.7065
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010411
(v1.0)
Idh3bNM_130884170718
0.3973130.492006
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010411
(v1.0)
6967H3039E07-5Idh3b170718
Idh3b2.88272.91812.77152.80043.18052.92973.0548
0010411
(v1.0)
14467J0524H11-3Mm.29590Idh3b170718
U023353NAP010336-001Idh3b;TC930161,TC930156,TC930155Q91VA7U,F,23.37053.30723.67463.8133.94343.94824.0296
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010411
(v1.0)
1418885_a_atMm.29590Idh3bNM_130884.4170718
69.6250101.225554.2751544.325
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010411
(v1.0)
Idh3b170718
798121716