DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010475
GeneIfrd1
SynonymsIfnl
PC4
Tis7
Desc.interferon-related developmental regulator 1
LocusNM_013562 chr12:40929716-40949776(-)
DB links


Entrez 15982
MGI 1316717
Ensembl ENSMUSG00000001627
Vega OTTMUSG00000035474
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010368
(v2.0)
Ifrd1NM_01356215982
19.349175.433158.121797.802294.711723.341757.506628.4277146.50826.3812
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010475
(v1.0)
Ifrd115982
Major ZGA0.89207
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010368
(v2.0)
Ifrd115982
685/4000.2627541/4000.3187429/4003.66231030/4002.688277/400-0.3156393/400-0.6229
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010368
(v2.0)
Ifrd115982
382/1900.4926267/1900.3729420/1904.6596941/1903.62224/190-0.8995137/190-1.0629
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010368
(v2.0)
Ifrd115982
53.556413739.09
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010368
(v2.0)
Ifrd115982
16.35719617.04
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010475
(v1.0)
Ifrd1NM_01356215982
78.375640.17672.823665.667940.8731
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010475
(v1.0)
Ifrd1FR305342,NM_01356215982
100.19463.7657116.686115.09282.0931
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010475
(v1.0)
Ifrd1NM_01356215982
81.94897.0761843.8328
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010475
(v1.0)
Ifrd1NM_01356215982
79.990239.772621.0734
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010475
(v1.0)
Ifrd1FR305342,NM_01356215982
465.895202.865
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010475
(v1.0)
Ifrd1NM_01356215982
81.99656.9792623.1126
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010475
(v1.0)
Ifrd1NM_01356215982
67.423363.405100.859
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010475
(v1.0)
Ifrd1FR305342,NM_01356215982
317.851454.008
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010475
(v1.0)
Ifrd1NM_01356215982
82.624151.1225
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010475
(v1.0)
Ifrd1NM_01356215982
98.3024102.28
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010475
(v1.0)
1416067_atMm.168Ifrd1NM_013562.215982
909.5251942.975858.125998.075597.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010475
(v1.0)
A_51_P367060Ifrd1NM_01356215982
11P0.6530.146P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010475
(v1.0)
Ifrd115982
010030