DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010480
GeneIft20
Synonyms
Desc.intraflagellar transport 20
LocusNM_018854 chr11:78349938-78354975(+)
DB links


Entrez 55978
MGI 1915585
Ensembl ENSMUSG00000001105
Vega OTTMUSG00000000139
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010373
(v2.0)
Ift20NM_01885455978
45.09245.404354.5287724.097318.27915.204212.31746.4687913.706820.4239
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010480
(v1.0)
Ift2055978
Major ZGA0.98659
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010373
(v2.0)
Ift2055978
704/497-0.0105449/497-0.2622125/4971.5864362/4970.870713/497-3.104118/497-2.6583
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010373
(v2.0)
Ift2055978
359/2000.3297197/200-0.1373119/2002.7791334/2002.05745/200-3.030873/200-2.0309
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010373
(v2.0)
Ift2055978
66.233715742.19
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010373
(v2.0)
Ift2055978
21.631311019.66
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010480
(v1.0)
Ift20NM_01885455978
5.617253.1443617.951412.66298.73778
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010480
(v1.0)
Ift20NM_01885455978
34.351912.638387.310767.885238.135
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010480
(v1.0)
Ift20NM_01885455978
5.8733516.49083.43056
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010480
(v1.0)
Ift20NM_01885455978
5.732973.112794.78871
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010480
(v1.0)
Ift20NM_01885455978
6.388119.9213
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010480
(v1.0)
Ift20NM_01885455978
5.8767616.26495.25209
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010480
(v1.0)
Ift20NM_01885455978
16.620212.22659.52633
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010480
(v1.0)
Ift20NM_01885455978
66.706647.9712
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010480
(v1.0)
Ift20NM_01885455978
36.123881.9737
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010480
(v1.0)
Ift20NM_01885455978
52.907778.4732
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010480
(v1.0)
1451412_a_atMm.358671Ift20NM_018854.455978
108.7204.325238.9139.8182.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010480
(v1.0)
A_51_P3468620610009H04RikNM_01885455978
11P0.2620.0473P
0010480
(v1.0)
A_51_P3468710610009H04RikNM_01885455978
11P0.5180.0959P
Proteome N/A