DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010627
GeneIlf3
SynonymsNF90
Desc.interleukin enhancer binding factor 3
LocusNM_010561 chr9:21172447-21209805(+)
NM_001042709 chr9:21172447-21206247(+)
NM_001042708 chr9:21172447-21206247(+)
NM_001042707 chr9:21172447-21209805(+)
DB links


Entrez 16201
MGI 1339973
Ensembl ENSMUSG00000032178
Featureprotein-coding
GO(BP)
  •   5 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      protein methylation (GO:0006479)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010524
(v2.0)
Ilf3NM_001042707,NM_001042708,NM_001042709,NM_001277321,NM_001277322,NM_01056116201
13.481432.004933.932537.366460.78678.503833.026635.228251.080472.4457
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010627
(v1.0)
Ilf316201
MGA0.94487
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010524
(v2.0)
Ilf316201
603/3540.2549365/354-0.0718203/3542.7573636/3542.168630/354-1.4725290/354-0.8836
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010524
(v2.0)
Ilf316201
350/1860.3974194/186-0.0551194/1863.5781589/1862.977311/186-1.928398/186-1.5094
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010524
(v2.0)
Ilf316201
44.438516826.45
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010524
(v2.0)
Ilf316201
11.90981309.16
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010627
(v1.0)
Ilf3NM_001042707,NM_001042708,NM_001042709,NM_01056116201
34.438924.329228.545143.222924.0109
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010627
(v1.0)
Ilf3FR161657,NM_001042707,NM_001042708,NM_001042709,NM_01056116201
187.7497.9704142.101216.843104.518
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010627
(v1.0)
Ilf3NM_001042707,NM_001042708,NM_001042709,NM_01056116201
36.0095.0525926.5437
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010627
(v1.0)
Ilf3NM_001042707,NM_001042708,NM_001042709,NM_01056116201
35.148324.084927.0648
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010627
(v1.0)
Ilf3FR161657,NM_001042707,NM_001042708,NM_001042709,NM_01056116201
298.457486.661
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010627
(v1.0)
Ilf3NM_001042707,NM_001042708,NM_001042709,NM_01056116201
36.02994.9833929.6838
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010627
(v1.0)
Ilf3NM_001042707,NM_001042708,NM_001042709,NM_01056116201
26.428341.733436.3257
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010627
(v1.0)
Ilf3FR161657,NM_001042707,NM_001042708,NM_001042709,NM_01056116201
192.389173.019
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010627
(v1.0)
Ilf3NM_001042707,NM_001042708,NM_001042709,NM_01056116201
28.941717.2835
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010627
(v1.0)
Ilf3NM_001042707,NM_001042708,NM_001042709,NM_01056116201
4.906184.7854
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010627
(v1.0)
4087C0915B04-3Mm.20935Ilf316201
U030579NAP123755-1Ilf3;U,F,23.62143.79874.22174.06373.71843.9453.7063
0010627
(v1.0)
6452H3025C12-3Mm.20935Ilf316201
U010141NAP104518-1Ilf3;TC793612,TC793611Q9Z1X4U,F,23.31493.25063.32163.96563.41473.66663.5871
0010627
(v1.0)
9165H3077D03-3Mm.20935Ilf316201
U010141NAP000630-001Ilf3;TC893382Q9Z1X4U,F,22.86043.0452.92063.28923.12053.04533.0338
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010627
(v1.0)
1460669_atMm.440026Ilf3NM_001042708.1,NM_001042709.1,NM_010561.2,NM_001042707.116201
256.575174.275203.125237.675238.375
0010627
(v1.0)
1436802_atMm.440026Ilf3NM_001042708.1,NM_001042709.1,NM_010561.2,NM_001042707.116201
86.45138.1138.45157.8593.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010627
(v1.0)
A_52_P508355Ilf3NM_01056116201
11P0.6170.135P
0010627
(v1.0)
A_52_P554267Ilf3NM_01056116201
11P0.430.0926P
0010627
(v1.0)
A_52_P626770Ilf3NM_01056116201
11P0.8450.45P
Proteome N/A