DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010772
GeneIsca1
SynonymsHbld2
Desc.iron-sulfur cluster assembly 1 homolog (S. cerevisiae)
LocusNM_026921 chr13:59856776-59871150(-)
DB links


Entrez 69046
MGI 1916296
Ensembl ENSMUSG00000044792
Vega OTTMUSG00000029126
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010670
(v2.0)
Isca1NM_02692169046
65.350252.787145.34220.672921.149326.580624.747344.987822.302528.0782
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010772
(v1.0)
Isca169046
Maternal RNA0.99551
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010670
(v2.0)
Isca169046
741/4640.1622516/4640.037902/4644.52442368/4643.675615/464-2.813198/464-2.8236
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010670
(v2.0)
Isca169046
420/2420.2815269/2420.0363840/2425.32762074/2424.41646/242-3.078360/242-2.5813
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010670
(v2.0)
Isca169046
77.557419240.39
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010670
(v2.0)
Isca169046
29.134414220.52
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010772
(v1.0)
Isca1NM_02692169046
54.855631.378715.3814.690117.6192
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010772
(v1.0)
Isca1NM_02692169046
8.004184.818652.625271.632892.75018
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010772
(v1.0)
Isca1NM_02692169046
57.356523.899334.2348
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010772
(v1.0)
Isca1NM_02692169046
55.985731.063633.3177
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010772
(v1.0)
Isca1NM_02692169046
4.892157.23145
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010772
(v1.0)
Isca1NM_02692169046
57.389923.571936.5418
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010772
(v1.0)
Isca1NM_02692169046
14.239514.183915.4565
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010772
(v1.0)
Isca1NM_02692169046
1.61521.1899
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010772
(v1.0)
Isca1NM_02692169046
19.10328.26078
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010772
(v1.0)
Isca1NM_02692169046
0.9781653.75375
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010772
(v1.0)
5962H3013H07-3Mm.78841810010A06Rik69046
U014597NAP094740-0011810010A06RikTC903424Q9D924U,F,23.20873.23933.16463.17662.88253.06153.1289
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010772
(v1.0)
1423651_atMm.7884Isca1NM_026921.469046
1110.75232.125346.225196.4670.15
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010772
(v1.0)
A_51_P355774Hbld2NM_02692169046
11P0.6420.141P
0010772
(v1.0)
A_52_P167189Hbld2NM_02692169046
11P1.030.898P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010772
(v1.0)
Isca169046
100100