DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010848
GeneItsn2
SynonymsEh domain, SH3 domain regulator of endocytosis 2
Ese2
Sh3d1B
Sh3p18
Desc.intersectin 2
LocusNM_001198968 chr12:4599814-4720758(+)
NM_001198969 chr12:4599814-4647945(+)
NM_011365 chr12:4599814-4720758(+)
DB links


Entrez 20403
MGI 1338049
Ensembl ENSMUSG00000020640
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010747
(v2.0)
Itsn2NM_001198968,NM_001198969,NM_01136520403
8.0150647.50258.552110.646513.16742.963247.8964742.974315.38572.8352
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010848
(v1.0)
Itsn220403
Maternal RNA0.95821
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010747
(v2.0)
Itsn220403
674/3850.2944465/3850.1558142/3852.1275399/3851.37721/385-2.087205/385-1.5017
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010747
(v2.0)
Itsn220403
345/1670.5313194/1670.0994136/1673.2142298/1672.154/167-3.039569/167-1.8518
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010747
(v2.0)
Itsn220403
50.360511444.18
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010747
(v2.0)
Itsn220403
15.00947619.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010848
(v1.0)
Itsn2NM_001198968,NM_001198969,NM_01136520403
49.384740.64897.906789.139825.56638
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010848
(v1.0)
Itsn2FR109736,FR190799,NM_001198968,NM_001198969,NM_01136520403
1744.211405.81164.637194.301109.071
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010848
(v1.0)
Itsn2NM_001198968,NM_001198969,NM_01136520403
51.63622.9311844.3488
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010848
(v1.0)
Itsn2NM_001198968,NM_001198969,NM_01136520403
50.402140.240731.854
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010848
(v1.0)
Itsn2FR109736,FR190799,NM_001198968,NM_001198969,NM_01136520403
1156.54890.045
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010848
(v1.0)
Itsn2NM_001198968,NM_001198969,NM_01136520403
51.66622.8910334.9364
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010848
(v1.0)
Itsn2NM_001198968,NM_001198969,NM_01136520403
7.320458.8248610.6703
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010848
(v1.0)
Itsn2FR109736,FR190799,NM_001198968,NM_001198969,NM_01136520403
126.618162.803
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010848
(v1.0)
Itsn2NM_001198968,NM_001198969,NM_01136520403
26.209912.6187
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010848
(v1.0)
Itsn2NM_001198968,NM_001198969,NM_01136520403
42.972632.4421
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010848
(v1.0)
11942H3128D06-3Mm.40285Sh3d1B20403
NAP032278-1TC8382473.67123.65573.13873.31873.14273.17363.1092
0010848
(v1.0)
18797L0227G11-3Mm.40285Sh3d1B20403
U013721NAP121700-001Sh3d1B;TC795089Q9CQD9U,F4.26284.34573.36052.78022.6222.75212.8057
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010848
(v1.0)
1431772_a_atMm.341204Itsn2NM_001198968.1,NM_011365.3,NM_001198969.120403
626.65991.725128.425077.125
0010848
(v1.0)
1423184_atMm.341204Itsn2NM_001198968.1,NM_011365.3,NM_001198969.120403
69.2588.62568.680.57551.1
0010848
(v1.0)
1435023_atMm.341204Itsn2NM_001198968.1,NM_011365.3,NM_001198969.120403
102.4143.0597.3132.27562.05
0010848
(v1.0)
1445375_atMm.341204Itsn2NM_001198968.1,NM_011365.3,NM_001198969.120403
000267.925265.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010848
(v1.0)
A_52_P480282Sh3d1BNM_01136520403
11P0.7760.247P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010848
(v1.0)
Itsn220403
34.5255.56