DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010858
GeneJag1
SynonymsABE2
Gsfabe2
Headturner
Htu
Ozz
Serrate-1
Desc.jagged 1
LocusNM_013822 chr2:136907187-136942256(-)
DB links


Entrez 16449
MGI 1095416
Ensembl ENSMUSG00000027276
Vega OTTMUSG00000015560
Featureprotein-coding
GO(BP)
  •   24 Terms
      morphogenesis of an epithelial sheet (GO:0002011)
      pulmonary valve morphogenesis (GO:0003184)
      cardiac right ventricle morphogenesis (GO:0003215)
      cell communication (GO:0007154)
      Notch signaling pathway (GO:0007219)
      multicellular organismal development (GO:0007275)
      organ morphogenesis (GO:0009887)
      response to muramyl dipeptide (GO:0032495)
      aorta morphogenesis (GO:0035909)
      regulation of cell proliferation (GO:0042127)
      auditory receptor cell differentiation (GO:0042491)
      negative regulation of cell differentiation (GO:0045596)
      negative regulation of fat cell differentiation (GO:0045599)
      positive regulation of myeloid cell differentiation (GO:0045639)
      negative regulation of neuron differentiation (GO:0045665)
      positive regulation of Notch signaling pathway (GO:0045747)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      inner ear development (GO:0048839)
      cardiac septum morphogenesis (GO:0060411)
      pulmonary artery morphogenesis (GO:0061156)
      cardiac neural crest cell development involved in outflow tract morphogenesis (GO:0061309)
      Notch signaling involved in heart development (GO:0061314)
      endocardial cushion cell development (GO:0061444)
      negative regulation of stem cell differentiation (GO:2000737)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010760
(v2.0)
Jag1NM_01382216449
4.24186149.46930.361219.155813.16481.096061.2150533.640820.98951.47004
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010858
(v1.0)
Jag116449
Maternal RNA0.99803
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010760
(v2.0)
Jag116449
973/4770.5147584/4770.1754133/4771.7331681/4771.8395395/4771.77682279/4771.6549
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010760
(v2.0)
Jag116449
544/1901.001269/1900.3836116/1902.8123566/1902.8897155/1901.74211027/1901.8296
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010760
(v2.0)
Jag116449
60.604823425.9
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010760
(v2.0)
Jag116449
6.99431524.6
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010858
(v1.0)
Jag1NM_01382216449
153.8121.588514.69469.484010.852485
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010858
(v1.0)
Jag1NM_01382216449
1126.82176.585181.101134.44710.5004
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010858
(v1.0)
Jag1NM_01382216449
160.8221.6038223.5535
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010858
(v1.0)
Jag1NM_01382216449
156.97821.371725.4724
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010858
(v1.0)
Jag1NM_01382216449
117.262163.135
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010858
(v1.0)
Jag1NM_01382216449
160.9161.5818527.9372
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010858
(v1.0)
Jag1NM_01382216449
13.60499.1571915.021
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010858
(v1.0)
Jag1NM_01382216449
62.729487.2184
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010858
(v1.0)
Jag1NM_01382216449
135.65.4695
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010858
(v1.0)
Jag1NM_01382216449
5.5283351.6837
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010858
(v1.0)
14077J0404D02-3Mm.22398Jag116449
U023414NAP007606-001Jag1;TC831927Q9QXX0U,F4.34324.0383.53553.68973.43313.32753.3313
0010858
(v1.0)
15590K0209E08-3Mm.22398Jag116449
U023414NAP007606-001Jag1;Q9QXX0U,F3.31863.15092.84172.93963.12492.98863.0309
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010858
(v1.0)
1421105_atMm.22398Jag1NM_013822.516449
0128.25000
0010858
(v1.0)
1434070_atMm.22398Jag1NM_013822.516449
5049.15428.8566.300
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010858
(v1.0)
A_51_P280906Jag1NM_01382216449
11P1.050.821P
0010858
(v1.0)
A_52_P634090Jag1NM_01382216449
11P0.770.232P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0010858
(v1.0)
Jag116449
240550