DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010896
GeneKalrn
SynonymsHapip
LOC224126
Desc.kalirin, RhoGEF kinase
LocusNM_177357 chr16:33969159-34514113(-)
NM_001164268 chr16:34152111-34514113(-)
DB links


Entrez 545156
MGI 2685385
Ensembl ENSMUSG00000061751
Vega OTTMUSG00000017795
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010797
(v2.0)
KalrnNM_001164268,NM_177357545156
0.1443257.7211914.49478.696585.991480.3264850.1944217.8295.219230.445873
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010896
(v1.0)
Kalrn545156
Minor ZGA0.98184
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010797
(v2.0)
Kalrn545156
695/552-0.1801429/552-0.478917/552-1.368954/552-2.0024124/552-0.09581200/5520.5202
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010797
(v2.0)
Kalrn545156
269/244-0.3704170/244-0.63437/244-1.399719/244-2.292355/244-0.09531/2440.5207
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010797
(v2.0)
Kalrn545156
100.879710893.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010797
(v2.0)
Kalrn545156
44.86584795.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
8.0387610.06256.458064.147030.135561
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
106.76790.6498358.826499.97413.8963
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
8.405260.052725810.9784
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
8.204379.9614513.2017
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
75.46132.41
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
8.410150.052003714.4792
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
5.979154.004123.62379
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
198.498167.814
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
8.118052.31674
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010896
(v1.0)
KalrnNM_001164268,NM_177357545156
2.311292.88487
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010896
(v1.0)
1436066_atMm.82274KalrnNM_177357.3,NM_001164268.1545156
136.4264.825000
0010896
(v1.0)
1429796_atMm.82274KalrnNM_177357.3,NM_001164268.1545156
228.875385.65274.3778.20
0010896
(v1.0)
1448023_atMm.82274KalrnNM_177357.3,NM_001164268.1545156
714.2751180.9583.200
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010896
(v1.0)
A_51_P400016KalrnAK088732545156
11P0.9950.967P
0010896
(v1.0)
A_52_P600492KalrnBC058850545156
11P0.7430.207P
Proteome N/A