DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010911
GeneKatna1
Synonyms
Desc.katanin p60 (ATPase-containing) subunit A1
LocusNM_011835 chr10:7445798-7482948(+)
DB links


Entrez 23924
MGI 1344353
Ensembl ENSMUSG00000019794
Vega OTTMUSG00000035234
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010817
(v2.0)
Katna1NM_01183523924
9.7682518.056118.576950.83228.689511.22029.9721818.031639.812313.1562
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010911
(v1.0)
Katna123924
2-Cell Transient0.99919
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010817
(v2.0)
Katna123924
565/3750.0783415/3750.0299129/3752.0267414/3751.467975/375-0.261524/375-0.1164
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010817
(v2.0)
Katna123924
233/1420.2003171/1420.1509121/1423.2638394/1422.781921/142-0.6742158/142-0.4417
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010817
(v2.0)
Katna123924
49.322812041.1
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010817
(v2.0)
Katna123924
13.94398117.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010911
(v1.0)
Katna1NM_01183523924
18.761712.897637.853719.91826.97915
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010911
(v1.0)
Katna1NM_01183523924
17.774512.249535.998919.92266.19009
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010911
(v1.0)
Katna1NM_01183523924
19.61713.5723514.0716
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010911
(v1.0)
Katna1NM_01183523924
19.148212.768113.3377
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010911
(v1.0)
Katna1NM_01183523924
12.437614.4047
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010911
(v1.0)
Katna1NM_01183523924
19.62853.5234214.6283
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010911
(v1.0)
Katna1NM_01183523924
35.046619.231827.4871
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010911
(v1.0)
Katna1NM_01183523924
19.707129.5818
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010911
(v1.0)
Katna1NM_01183523924
18.273241.7416
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010911
(v1.0)
Katna1NM_01183523924
45.073132.566
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010911
(v1.0)
11727H3122B03-3Mm.28127Katna123924
U011242NAP094748-001Katna1;TC898702Q9WV86U,F3.37063.36113.41523.65612.7313.01212.8869
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0010911
(v1.0)
1450949_atMm.28127Katna1NM_011835.223924
485.1617.1995.95268.7263.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010911
(v1.0)
A_51_P493857Katna1NM_01183523924
11P0.6340.138P
Proteome N/A