DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0010914
GeneKatnb1
SynonymsKAT
Desc.katanin p80 (WD40-containing) subunit B 1
LocusNM_028805 chr8:97605101-97623774(+)
DB links


Entrez 74187
MGI 1921437
Ensembl ENSMUSG00000031787
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010820
(v2.0)
Katnb1NM_02880574187
12.628210.34769.750566.318387.5212812.49076.8502311.7516.4417311.39
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0010914
(v1.0)
Katnb174187
Maternal RNA0.90548
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010820
(v2.0)
Katnb174187
791/567-0.0324410/567-0.5827178/5671.9071402/5670.832353/567-1.3451467/567-0.8771
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010820
(v2.0)
Katnb174187
357/2370.0779192/237-0.4179167/2373.0326357/2371.911114/237-1.9492119/237-1.5811
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010820
(v2.0)
Katnb174187
95.105818052.84
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010820
(v2.0)
Katnb174187
15.81529915.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
10.76036.786484.706485.195314.8334
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
175.705126.99866.775988.038168.5805
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
11.25094.618277.4042
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
10.98196.718348.70898
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
180.045154.155
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
11.25744.555029.55172
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
4.357465.016284.46538
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
107.17178.8235
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0010914
(v1.0)
Katnb1NM_02880574187
1.872681.04007
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0010914
(v1.0)
Katnb1NM_02880574187
1.624480.284984
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0010914
(v1.0)
3640C0842D02-3Mm.28382Katnb174187
U009683NAP000986-002Katnb1;TC842132Q9CWV23.89354.06653.48993.45243.12923.32143.4032
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0010914
(v1.0)
A_51_P253204Katnb1NM_02880574187
11P0.4790.106P
0010914
(v1.0)
A_52_P448510Katnb1NM_02880574187
11P1.0170.949P
Proteome N/A