DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011040
GeneKctd3
SynonymsNY-REN-45
Desc.potassium channel tetramerisation domain containing 3
LocusNM_172650 chr1:190794977-190831719(-)
DB links


Entrez 226823
MGI 2444629
Ensembl ENSMUSG00000026608
Featureprotein-coding
GO(BP)
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010946
(v2.0)
Kctd3NM_172650226823
5.12881101.811214.64872.152133.485417.845914.1873210.93732.377517.733
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011040
(v1.0)
Kctd3226823
Minor ZGA0.97552
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010946
(v2.0)
Kctd3226823
695/4860.0032413/486-0.350269/4860.77175/486-0.1415111/486-0.072686/486-0.1019
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010946
(v2.0)
Kctd3226823
308/1680.3598147/168-0.306856/1681.941142/1681.077413/168-1.5625102/168-1.3065
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010946
(v2.0)
Kctd3226823
67.54512255.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010946
(v2.0)
Kctd3226823
19.00417027.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011040
(v1.0)
Kctd3NM_172650226823
105.845148.86953.731123.165610.0956
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011040
(v1.0)
Kctd3FR104985,NM_172650226823
678.4571128.98351.891139.2259.9932
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011040
(v1.0)
Kctd3NM_172650226823
110.6711.87566162.42
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011040
(v1.0)
Kctd3NM_172650226823
108.026147.375156.297
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011040
(v1.0)
Kctd3FR104985,NM_172650226823
2099.82370.13
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011040
(v1.0)
Kctd3NM_172650226823
110.7351.84997171.421
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011040
(v1.0)
Kctd3NM_172650226823
49.746622.367322.4876
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011040
(v1.0)
Kctd3FR104985,NM_172650226823
105.881106.052
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011040
(v1.0)
Kctd3NM_172650226823
140.81414.853
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011040
(v1.0)
Kctd3NM_172650226823
36.3116.9911
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011040
(v1.0)
12620H3148F11-3Mm.414959330185B06226823
U022186NAP121038-001E330032J19Rik;TC853171,TC853169U,F,24.444.61123.81473.92823.33853.48953.4375
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011040
(v1.0)
1455816_a_atMm.209880Kctd3NM_172650.2226823
7750.5759088.87000.21353.7252574.325
0011040
(v1.0)
1436811_atMm.209880Kctd3NM_172650.2226823
1681.5752047.875256800
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011040
(v1.0)
A_51_P244453Kctd3NM_172650226823
11P0.8420.452P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011040
(v1.0)
Kctd3226823
2.520320