DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011053
GeneKdm1b
SynonymsAof1
Descriptionlysine (K)-specific demethylase 1B
LocusNM_172262 UCSC: chr13:47138868-47180648(+) OLP: chr13:47138868-47180648(+)
DB links


Entrez 218214
MGI 2145261
Ensembl ENSMUSG00000038080
Vega OTTMUSG00000024759
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2010960 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011053
(v1.0)
Kdm1bNM_172262218214
76.642661.166521.51347.694055.79436
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011053
(v1.0)
Kdm1bNM_172262218214
80.13680.9837966.734
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011053
(v1.0)
Kdm1bNM_172262218214
78.221560.552448.5227
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011053
(v1.0)
Kdm1bNM_172262218214
80.18340.97031553.218
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011053
(v1.0)
Kdm1bNM_172262218214
19.91817.428919.04736
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011053
(v1.0)
Kdm1bNM_172262218214
27.36115.43058
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011053
(v1.0)
Kdm1bNM_172262218214
14.555430.9016
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011053
(v1.0)
18381L0204G12-3Mm.31259MGC38211218214
U014800NAP116007-1TC894503,TC894502,TC816190,TC794617U,F,24.20794.5294.96944.64514.13084.54384.2276
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011053
(v1.0)
1433649_atMm.31259Kdm1bNM_172262.2218214
2524.152931.82939.6153.725129.275
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0011053
(v1.0)
A_51_P111245Aof1NM_172262218214
11P0.650.145P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011053
(v1.0)
Aof1218214
120.67130.67