DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011083
GeneKhsrp
SynonymsKSRP
Desc.KH-type splicing regulatory protein
LocusNM_010613 chr17:57160472-57170930(-)
DB links


Entrez 16549
MGI 1336214
Ensembl ENSMUSG00000007670
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2010992
(v2.0)
KhsrpNM_01061316549
18.442862.512107.12170.315869.643233.469823.8156172.47856.118636.5781
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011083
(v1.0)
Khsrp16549
Minor ZGA0.94133
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010992
(v2.0)
Khsrp16549
662/515-0.1503381/515-0.5497107/5151.3139391/5150.930556/515-1.1294427/515-0.8674
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2010992
(v2.0)
Khsrp16549
273/216-0.1741157/216-0.573289/2162.2592264/2161.60959/216-2.4027115/216-1.4965
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010992
(v2.0)
Khsrp16549
68.538114946
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2010992
(v2.0)
Khsrp16549
15.25929216.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
65.013774.366852.312348.190716.7269
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
323.535364.315291.365265.72886.0038
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
67.97786.7447381.1359
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
66.353173.6201128.024
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
7411.387181.85
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
68.01736.65235140.413
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
48.43346.5339.0264
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
455.989263.479
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011083
(v1.0)
KhsrpNM_01061316549
39.520936.9124
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011083
(v1.0)
KhsrpNM_01061316549
3.4747713.6601
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011083
(v1.0)
13248J0008F03-3Mm.34296Khsrp16549
TC8194013.21963.10713.02683.28353.25533.21553.1493
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011083
(v1.0)
1436813_x_atMm.34296KhsrpNM_010613.316549
854.4251394.1751603.0751231.551239.175
0011083
(v1.0)
1452690_atMm.34296KhsrpNM_010613.316549
0182.30150.10
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011083
(v1.0)
A_51_P281700KhsrpNM_01061316549
11P1.0550.684P
0011083
(v1.0)
A_52_P123252KhsrpNM_01061316549
11P0.7450.247P
Proteome N/A