DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011165
GeneKlhdc3
SynonymsPeas
Desc.kelch domain containing 3
LocusNM_027910 chr17:46811500-46817879(-)
NM_001163729 chr17:46811500-46817879(-)
DB links


Entrez 71765
MGI 2651568
Ensembl ENSMUSG00000063576
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011075
(v2.0)
Klhdc3NM_001163729,NM_02791071765
110.334189.942240.44825.55158.4259360.093323.3382410.59114.481763.9868
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011165
(v1.0)
Klhdc371765
Maternal RNA0.9761
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011075
(v2.0)
Klhdc371765
956/5750.2203495/575-0.33171179/5754.60813122/5753.766316/575-3.0326111/575-2.9553
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011075
(v2.0)
Klhdc371765
379/2170.2905206/217-0.1903729/2175.27281683/2174.27086/217-2.923848/217-2.7377
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011075
(v2.0)
Klhdc371765
152.091923863.9
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011075
(v2.0)
Klhdc371765
31.832811128.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
197.49166.65519.02475.783316.626
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
1167.91735.58186.243344.969581.8162
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
206.49440.3512181.825
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
201.559164.982304.676
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
203.692376.185
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
206.61439.7985334.158
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
17.61395.5840110.1401
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
56.8646117.626
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
43.79912.4595
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011165
(v1.0)
Klhdc3NM_001163729,NM_02791071765
2.424986.89935
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011165
(v1.0)
19597L0284D04-3Mm.1814831300011D16Rik71765
U037865NAP031777-11300011D16Rik;TC798492,TC798483,TC798479Q9DBG8U,F,23.66643.59123.66883.5184.02433.81343.9429
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011165
(v1.0)
1415991_a_atMm.254784Klhdc3NM_027910.3,NM_001163729.271765
1481.725927.025634.10379.525
0011165
(v1.0)
1454747_a_atMm.254784Klhdc3NM_027910.3,NM_001163729.271765
1200.45565.75338.40182.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011165
(v1.0)
A_51_P148122Klhdc3NM_02791071765
11P2.1220.0839P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011165
(v1.0)
Klhdc371765
110120