DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0011282

Gene

Kpna6

Synonyms

IPOA7
NPI-2

Description

karyopherin (importin) alpha 6

Locus

NM_008468 UCSC: chr4:129321223-129350011(-) OLP: chr4:129321223-129350011(-)

DB links

Entrez 16650
MGI 1100836
Ensembl ENSMUSG00000003731
Vega OTTMUSG00000009518

Feature

protein-coding

GO_BP

3 Terms

GO_MF

2 Terms

GO_CC

2 Terms

KEGG

see DBTMEE:2011200 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0011282 (v1.0)	Kpna6	NM_008468	16650	28.7158	31.2286	33.4622	15.0064	16.9446

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0011282 (v1.0)	Kpna6	NM_008468	16650	30.025	5.82716	34.0711

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0011282 (v1.0)	Kpna6	NM_008468	16650	29.3074	30.9151	32.8348

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0011282 (v1.0)	Kpna6	NM_008468	16650	30.0425	5.74735	36.0121

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0011282 (v1.0)	Kpna6	NM_008468	16650	30.9807	14.4893	13.1611

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0011282 (v1.0)	Kpna6	NM_008468	16650	28.2555	21.031

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0011282 (v1.0)	Kpna6	NM_008468	16650	4.59966	5.04081

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0011282 (v1.0)	5352	NM_008468.1	Mm.200776	Kpna6	16650	U025566	NAP000839-001	Kpna6;	TC941104	O35345	U,F,2	3.514	3.6156	4.0822	3.7664	3.5403	3.7143	3.5467
0011282 (v1.0)	7820	H3054E06-3	Mm.202358		230769	U025566	NAP000839-001	Kpna6;	TC941108,TC941102	O35345	U,F,2	3.6689	3.676	3.5195	3.7424	3.4086	3.5998	3.7004

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0011282 (v1.0)	1418590_at	Mm.202358	Kpna6	NM_008468.4	16650	50.95	79.075	112.5	69.25	54.825
0011282 (v1.0)	1426796_at	Mm.202358	Kpna6	NM_008468.4	16650	105.525	155.6	156.6	120.275	158.4

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0011282 (v1.0)	A_52_P199586	Kpna6	BC058586	16650	1	1	P	1.486	0.157	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0011282 (v1.0)	Kpna6	16650	3	3	1	7	6	1