DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011294
GeneKrr1
SynonymsD10Ertd773e
Hrb2
Desc.KRR1, small subunit (SSU) processome component, homolog (yeast)
LocusNM_178610 chr10:111409751-111425486(+)
DB links


Entrez 52705
MGI 1289274
Ensembl ENSMUSG00000063334
Vega OTTMUSG00000027781
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011212
(v2.0)
Krr1NM_17861052705
6.8125623.751825.028539.238952.511513.389310.231214.91946.695314.478
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011294
(v1.0)
Krr152705
MGA0.9919
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011212
(v2.0)
Krr152705
657/4570.0109466/457-0.087998/4571.3566305/4570.7447146/4570.4083801/4570.2098
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011212
(v2.0)
Krr152705
286/1530.3874194/1530.22588/1532.7093260/1532.078343/1530.2211192/153-0.2698
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011212
(v2.0)
Krr152705
85.604215156.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011212
(v2.0)
Krr152705
17.35598121.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011294
(v1.0)
Krr1NM_17861052705
24.671917.322329.211636.39997.28915
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011294
(v1.0)
Krr1NM_17861052705
442.64350.397341.466502.447105.787
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011294
(v1.0)
Krr1NM_17861052705
25.79672.4914218.899
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011294
(v1.0)
Krr1NM_17861052705
25.180117.148411.0456
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011294
(v1.0)
Krr1NM_17861052705
929.985671.65
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011294
(v1.0)
Krr1NM_17861052705
25.81172.457312.1144
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011294
(v1.0)
Krr1NM_17861052705
27.045435.145632.2722
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011294
(v1.0)
Krr1NM_17861052705
502.891359.225
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011294
(v1.0)
Krr1NM_17861052705
18.795725.2444
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011294
(v1.0)
Krr1NM_17861052705
1.115331.56847
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011294
(v1.0)
296C0036E05-5Mm.34606D10Ertd773e52705
U012010NAP001784-001TC799535,TC799534,TC799533U,F,23.03463.06753.03922.99733.30473.06663.1319
0011294
(v1.0)
10244H3093B10-3Mm.34606D10Ertd773e52705
U012010NAP001784-001TC799534,TC799533U,F,23.20953.25763.5693.84423.37823.53483.2766
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011294
(v1.0)
1428084_atMm.34606Krr1NM_178610.452705
347.3111.3467.125688.35481.65
0011294
(v1.0)
1420139_s_atMm.34606Krr1NM_178610.452705
1579.6302.8751895.7754334.8752988.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011294
(v1.0)
A_52_P169507Hrb2NM_17861052705
11P0.5850.185P
Proteome N/A