DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011546
GeneLdhb
SynonymsH-Ldh
lactate dehydrogenase-B
Ldh-2
Desc.lactate dehydrogenase B
LocusNM_008492 chr6:142438769-142456463(-)
DB links


Entrez 16832
MGI 96763
Ensembl ENSMUSG00000030246
Vega OTTMUSG00000016379
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011485
(v2.0)
LdhbNM_00849216832
316.9871764.34969.77583.412239.5664330.3939.4591954.35888.7444379.437
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011546
(v1.0)
Ldhb16832
Maternal RNA0.95148
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011485
(v2.0)
Ldhb16832
714/4520.1465547/4520.158745/4520.2662175/452-0.0375477/4522.12522151/4521.6491
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011485
(v2.0)
Ldhb16832
375/2040.3639274/2040.30836/2041.0547141/2040.7909319/2042.67811325/2042.0946
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011485
(v2.0)
Ldhb16832
63.150813148.21
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011485
(v2.0)
Ldhb16832
17.33556925.12
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011546
(v1.0)
LdhbNM_00849216832
1833.64673.82862.042327.32046.62667
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011546
(v1.0)
LdhbNM_00849216832
960.222308.0427.279111.85012.98617
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011546
(v1.0)
LdhbNM_00849216832
1917.24115.925735.161
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011546
(v1.0)
LdhbNM_00849216832
1871.42667.062708.455
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011546
(v1.0)
LdhbNM_00849216832
312.7581445.34
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011546
(v1.0)
LdhbNM_00849216832
1918.35114.338777.01
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011546
(v1.0)
LdhbNM_00849216832
57.441526.378962.2606
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011546
(v1.0)
LdhbNM_00849216832
11.722526.2204
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011546
(v1.0)
LdhbNM_00849216832
980.9945.1907
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011546
(v1.0)
LdhbNM_00849216832
1446.02593.816
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011546
(v1.0)
1416183_a_atMm.9745LdhbNM_008492.216832
6691.7756783.9752147.725343123.35
0011546
(v1.0)
1434499_a_atMm.9745LdhbNM_008492.216832
5898.0255981.551965.369.50
0011546
(v1.0)
1455235_x_atMm.9745LdhbNM_008492.216832
5804.756730.6251876.795.1250
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011546
(v1.0)
A_51_P409173Ldh2NM_00849216832
11P0.9210.561P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011546
(v1.0)
Ldhb16832
13892851223686439311