DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011553
GeneLdlrap1
SynonymsArh
Arh1
Desc.low density lipoprotein receptor adaptor protein 1
LocusNM_145554 chr4:134301327-134323919(-)
DB links


Entrez 100017
MGI 2140175
Ensembl ENSMUSG00000037295
Vega OTTMUSG00000011121
Featureprotein-coding
GO(BP)
  •   13 Terms
      lipid metabolic process (GO:0006629)
      endocytosis (GO:0006897)
      receptor-mediated endocytosis (GO:0006898)
      steroid metabolic process (GO:0008202)
      cholesterol metabolic process (GO:0008203)
      positive regulation of signal transduction (GO:0009967)
      receptor internalization (GO:0031623)
      cholesterol homeostasis (GO:0042632)
      amyloid precursor protein metabolic process (GO:0042982)
      regulation of protein binding (GO:0043393)
      positive regulation of receptor-mediated endocytosis (GO:0048260)
      regulation of establishment of protein localization to plasma membrane (GO:0090003)
      receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (GO:0090118)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011493
(v2.0)
Ldlrap1NM_145554100017
21.94.959886.8430920.757321.44924.468212.970659.0075812.77474.84752
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011553
(v1.0)
Ldlrap1100017
Major ZGA0.99089
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011493
(v2.0)
Ldlrap1100017
746/4750.1382350/475-0.5553141/4751.8226389/4751.0392144/4750.3333986/4750.4535
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011493
(v2.0)
Ldlrap1100017
380/1860.5156173/186-0.2195129/1862.9931348/1862.219887/1860.9461504/1860.8354
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011493
(v2.0)
Ldlrap1100017
85.482515555.15
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011493
(v2.0)
Ldlrap1100017
20.878524.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
5.15754.7466915.466414.91382.08883
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
20.887821.165.682349.62916.64167
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
5.392648.009075.17874
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
5.263754.699036.66912
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
41.21443.0226
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
5.395787.899377.31446
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
14.319514.39988.90026
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
49.093524.6703
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011553
(v1.0)
Ldlrap1NM_145554100017
2.749130.2106
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011553
(v1.0)
Ldlrap1NM_145554100017
0.1272390.590866
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011553
(v1.0)
15959K0313G08-3Mm.27486AA691260100017
U025647NAP099100-001AA691260;TC904865,TC904864U,F,22.81392.83263.01843.04482.79353.01992.8549
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011553
(v1.0)
1424378_atMm.482148Ldlrap1NM_145554.2100017
68.667.594.25178.825188.275
0011553
(v1.0)
1458060_atMm.482148Ldlrap1NM_145554.2100017
216.4220.2224.075366.65390.95
Agilent44K N/A
Proteome N/A