DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011638
GeneLimk2
SynonymsLIM kinase 2
Limk2a
Limk2b
Desc.LIM motif-containing protein kinase 2
LocusNM_173053 chr11:3243300-3271395(-)
NM_010718 chr11:3243386-3309238(-)
NM_001034030 chr11:3243386-3256144(-)
DB links


Entrez 16886
MGI 1197517
Ensembl ENSMUSG00000020451
Vega OTTMUSG00000000764
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011578
(v2.0)
Limk2NM_001034030,NM_010718,NM_17305316886
11.808725.62229.69889.404164.4827720.33925.0858130.98725.5418719.5422
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011638
(v1.0)
Limk216886
Minor ZGA0.9616
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011578
(v2.0)
Limk216886
723/537-0.0836450/537-0.370432/537-0.4556119/537-0.837315/537-3.0221128/537-2.6538
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011578
(v2.0)
Limk216886
256/184-0.0362176/184-0.179321/1840.444893/1840.34278/184-2.328148/184-2.5009
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011578
(v2.0)
Limk216886
113.926512094.94
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011578
(v2.0)
Limk216886
34.92583891.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011638
(v1.0)
Limk2NM_001034030,NM_010718,NM_17305316886
27.265920.94477.011133.106483.66206
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011638
(v1.0)
Limk2FR081180,FR191610,NM_001034030,NM_010718,NM_17305316886
741.546486.091113.27137.729449.6824
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011638
(v1.0)
Limk2NM_001034030,NM_010718,NM_17305316886
28.5094.4176922.8512
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011638
(v1.0)
Limk2NM_001034030,NM_010718,NM_17305316886
27.827620.734423.0614
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011638
(v1.0)
Limk2FR081180,FR191610,NM_001034030,NM_010718,NM_17305316886
180.431212.801
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011638
(v1.0)
Limk2NM_001034030,NM_010718,NM_17305316886
28.52564.3571825.293
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011638
(v1.0)
Limk2NM_001034030,NM_010718,NM_17305316886
6.491222.999433.86781
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011638
(v1.0)
Limk2FR081180,FR191610,NM_001034030,NM_010718,NM_17305316886
27.944183.0745
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011638
(v1.0)
Limk2NM_001034030,NM_010718,NM_17305316886
32.85642.86407
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011638
(v1.0)
Limk2NM_001034030,NM_010718,NM_17305316886
12.12468.7404
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011638
(v1.0)
3099C0601E07-3Mm.42927Limk216886
U032431NAP107330-1Limk2;TC898218O54776U,F,22.38212.5942.54632.54392.39442.43922.4174
0011638
(v1.0)
10908H3105C10-3Mm.42927Limk216886
U032431NAP094011-001Limk2;TC898217,TC898216O54776U,F,23.45533.35013.15913.18283.21953.22873.2917
0011638
(v1.0)
16031K0322C02-3Limk216886
U032431NAP094011-001Limk2;TC898217,TC898216O54776U,F,22.71082.82812.71032.782.46192.74382.7663
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011638
(v1.0)
1418581_a_atMm.124176Limk2NM_173053.1,NM_010718.3,NM_001034030.116886
233.750000
0011638
(v1.0)
1452060_a_atMm.124176Limk2NM_173053.1,NM_010718.3,NM_001034030.116886
0172.17500109.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011638
(v1.0)
A_51_P289223Limk2NM_01071816886
11P0.9550.736P
0011638
(v1.0)
A_52_P393755Limk2NM_01071816886
11P1.180.36P
Proteome N/A