DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011649
GeneLin9
Synonyms
Desc.lin-9 homolog (C. elegans)
LocusNM_175186 chr1:182571465-182611757(+)
NM_001103182 chr1:182571465-182620818(+)
DB links


Entrez 72568
MGI 1919818
Ensembl ENSMUSG00000058729
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011589
(v2.0)
Lin9NM_001103182,NM_175186,NR_12049872568
1.686825.917979.5203325.951724.48085.957797.091617.0254318.39945.62025
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011649
(v1.0)
Lin972568
Major ZGA0.98757
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011589
(v2.0)
Lin972568
778/4060.4246521/4060.2431148/4062.1124334/4061.0451112/4060.1979605/406-0.0238
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011589
(v2.0)
Lin972568
408/1630.8071253/1630.5154138/1633.2677301/1632.198950/1630.3451243/163-0.0231
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011589
(v2.0)
Lin972568
46.090413933.16
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011589
(v2.0)
Lin972568
11.6269711.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011649
(v1.0)
Lin9NM_001103182,NM_17518672568
6.486257.0219920.521718.07535.3871
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011649
(v1.0)
Lin9FR071967,FR187805,NM_001103182,NM_17518672568
44.759127.690666.93537.048212.0683
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011649
(v1.0)
Lin9NM_001103182,NM_17518672568
6.781970.6575917.66115
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011649
(v1.0)
Lin9NM_001103182,NM_17518672568
6.619886.951495.51339
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011649
(v1.0)
Lin9FR071967,FR187805,NM_001103182,NM_17518672568
50.7557107.078
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011649
(v1.0)
Lin9NM_001103182,NM_17518672568
6.785920.6485846.0469
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011649
(v1.0)
Lin9NM_001103182,NM_17518672568
18.999817.452413.5341
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011649
(v1.0)
Lin9FR071967,FR187805,NM_001103182,NM_17518672568
22.578616.802
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011649
(v1.0)
Lin9NM_001103182,NM_17518672568
4.58094.83627
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011649
(v1.0)
Lin9NM_001103182,NM_17518672568
0.5284932.41521
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011649
(v1.0)
1428639_atMm.275044Lin9NM_001103182.1,NM_175186.472568
32.22553.7113.225112.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011649
(v1.0)
A_52_P330984Lin9AK08998972568
11P0.6450.214P
Proteome N/A