DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011668
GeneLitaf
SynonymsN4WBP3
Nedd4 WW domain-binding protein 3
TBX1 protein
Desc.LPS-induced TN factor
LocusNM_019980 chr16:10959366-10993214(-)
DB links


Entrez 56722
MGI 1929512
Ensembl ENSMUSG00000022500
Vega OTTMUSG00000026365
Featureprotein-coding
GO(BP)
  •   9 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011611
(v2.0)
LitafNM_01998056722
204.82923.171837.476853.632973.553525.694914.077540.089353.85828.1131
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011668
(v1.0)
Litaf56722
MGA0.9533
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011611
(v2.0)
Litaf56722
729/4710.1171456/471-0.1625138/4711.8037519/4711.4664229/4711.0111101/4710.6246
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011611
(v2.0)
Litaf56722
391/1910.5185241/1910.2182130/1912.9682482/1912.6509164/1911.8156806/1911.473
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011611
(v2.0)
Litaf56722
75.083516545.51
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011611
(v2.0)
Litaf56722
19.098710118.91
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011668
(v1.0)
LitafNM_01998056722
24.105725.939639.956450.9289.91018
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011668
(v1.0)
LitafNM_01998056722
29.00928.386744.834958.538111.4695
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011668
(v1.0)
LitafNM_01998056722
25.204774.908228.3006
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011668
(v1.0)
LitafNM_01998056722
24.602325.679129.6896
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011668
(v1.0)
LitafNM_01998056722
28.825834.0039
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011668
(v1.0)
LitafNM_01998056722
25.219373.882232.5625
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011668
(v1.0)
LitafNM_01998056722
36.993449.17337.2862
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011668
(v1.0)
LitafNM_01998056722
57.906543.9024
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011668
(v1.0)
LitafNM_01998056722
27.662422.3364
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011668
(v1.0)
LitafNM_01998056722
36.536635.3406
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011668
(v1.0)
11089H3108B10-3Mm.21119Litaf56722
U036788NAP095128-001Litaf;TC847362Q9EQI0U,F,23.32443.44013.55763.72873.34653.45243.5397
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011668
(v1.0)
1416303_atMm.294753LitafNM_019980.256722
410.225723.65618.825869.475848.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011668
(v1.0)
A_51_P267239LitafNM_01998056722
11P1.3320.213P
0011668
(v1.0)
A_52_P210893LitafNM_01998056722
11P1.1750.354P
Proteome N/A