DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011689
GeneLmo1
SynonymsRbtn-1
Rbtn1
Ttg1
Desc.LIM domain only 1
LocusNM_057173 chr7:116282086-116313822(-)
DB links


Entrez 109594
MGI 102812
Ensembl ENSMUSG00000036111
Featureprotein-coding
GO(BP)
  •   2 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011633
(v2.0)
Lmo1NM_057173109594
3.67524176.699310.50522.29337.791711.017331.40974446.65212.96921.21745
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011689
(v1.0)
Lmo1109594
Minor ZGA0.98587
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011633
(v2.0)
Lmo1109594
915/5350.261510/535-0.184945/5350.0289284/5350.4159335/5351.37552121/5351.3861
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011633
(v2.0)
Lmo1109594
416/1960.5705251/1960.239521/1960.3591174/1961.1494194/1962.02011077/1961.8534
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011633
(v2.0)
Lmo1109594
65.53717038.55
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011633
(v2.0)
Lmo1109594
12.2099013.57
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
183.723215.49216.62165.412281.03823
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
402.238387.55435.480310.36522.50098
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
192.11.34407235.106
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
187.508213.328331.475
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
393.54632.938
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
192.2111.32566363.55
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
15.3895.225788.99767
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
10.819617.8948
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011689
(v1.0)
Lmo1NM_057173109594
12.3982.09614
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011689
(v1.0)
Lmo1NM_057173109594
441.771236.835
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011689
(v1.0)
9699H3085B10-3Mm.12607Lmo1109594
Lmo13.57963.53543.08282.79842.54422.5322.5691
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011689
(v1.0)
1418478_atMm.360145Lmo1NM_057173.2109594
1192.81845.4751114.22500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011689
(v1.0)
A_52_P331762Lmo1NM_057173109594
11P0.6610.15P
Proteome N/A