DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011710
GeneLonrf3
SynonymsRnf127
Desc.LON peptidase N-terminal domain and ring finger 3
LocusNM_028894 chrX:33868404-33906851(+)
DB links


Entrez 74365
MGI 1921615
Ensembl ENSMUSG00000016239
Vega OTTMUSG00000017249
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011654
(v2.0)
Lonrf3NM_02889474365
4.3555814.851721.932217.907310.36141.403082.5836713.366814.46732.54996
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011710
(v1.0)
Lonrf374365
Minor ZGA0.97212
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011654
(v2.0)
Lonrf374365
518/2350.6253292/2350.1963148/2352.8711435/2352.2076140/2351.29551005/2351.4932
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011654
(v2.0)
Lonrf374365
305/821.3715140/820.6492140/824.184392/823.548540/820.9863425/821.7621
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011654
(v2.0)
Lonrf374365
27.210610525.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011654
(v2.0)
Lonrf374365
3.9398794.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
15.43215.126413.33267.189741.81581
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
107.017108.51276.598940.488311.1101
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
16.13561.5928816.5032
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
15.749914.97459.90666
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
83.114384.1831
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
16.14491.5710610.8653
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
12.34396.941989.95576
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
36.299367.4739
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011710
(v1.0)
Lonrf3NM_02889474365
4.2263419.9028
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011710
(v1.0)
Lonrf3NM_02889474365
0.1022530.663266
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011710
(v1.0)
1429863_atMm.327654Lonrf3NM_028894.174365
1235.2435.51807.2810.9427.475
0011710
(v1.0)
1436200_atMm.327654Lonrf3NM_028894.174365
0565.675000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011710
(v1.0)
A_51_P479818Rnf127NM_02889474365
11P0.3850.0782P
Proteome N/A