DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011741
GeneLrba
SynonymsD3Ertd775e
Lba
Desc.LPS-responsive beige-like anchor
LocusNM_030695 chr3:86028612-86586616(+)
NM_001077688 chr3:86028612-86580893(+)
NM_001077687 chr3:86028612-86550632(+)
DB links


Entrez 80877
MGI 1933162
Ensembl ENSMUSG00000028080
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011685
(v2.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
5.738866.8998113.641919.842317.85472.494471.9788111.639919.22132.05835
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011741
(v1.0)
Lrba80877
Major ZGA0.89022
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011685
(v2.0)
Lrba80877
646/3570.3419416/3570.1042118/3571.9679256/3570.84761/357-0.4845333/357-0.6972
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011685
(v2.0)
Lrba80877
382/1400.9304211/1400.4727116/1403.2222241/1402.095220/140-0.7215141/140-0.5839
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011685
(v2.0)
Lrba80877
36.758314725.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011685
(v2.0)
Lrba80877
8.52131177.28
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
7.171999.4314214.778712.3611.35965
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
18.381149.482989.4809106.3928.52899
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
7.498982.0987610.2899
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
7.319749.336728.60774
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
102.281101.295
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
7.503342.070019.44067
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
13.682811.935113.2362
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
92.847178.3051
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
4.031643.08665
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011741
(v1.0)
LrbaNM_001077687,NM_001077688,NM_03069580877
1.031051.50675
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011741
(v1.0)
7355H3046G08-3Lrba80877
U003396NAP105611-1Lbabeta;Lrba;TC826552Q9ESE12.58282.55472.75452.51732.48572.64292.5415
0011741
(v1.0)
9522H3082F12-3Mm.28458Lrba80877
U003396NAP036747-1Lbabeta;Lrba;TC826554Q9ESE13.41923.35143.35573.30823.54783.38613.4218
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011741
(v1.0)
1449099_atMm.439825LrbaNM_030695.2,NM_001077688.1,NM_001077687.180877
195.375212.05224.65172.45343.45
0011741
(v1.0)
1436690_atMm.439825LrbaNM_030695.2,NM_001077688.1,NM_001077687.180877
42.87575.775000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011741
(v1.0)
A_51_P338837LrbaNM_03069580877
11P0.5930.134P
0011741
(v1.0)
A_52_P159336LrbaAK08520880877
11P2.3310.0938P
0011741
(v1.0)
A_52_P594302LrbaAF18850680877
11P0.7180.196P
Proteome N/A