DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011785
GeneLrrc17
Synonyms37kDa
Desc.leucine rich repeat containing 17
LocusNM_028977 chr5:21049345-21081720(+)
DB links


Entrez 74511
MGI 1921761
Ensembl ENSMUSG00000039883
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011729
(v2.0)
Lrrc17NM_02897774511
0.803771200.29356.280116.37235.070381.162432.7111949.531412.42420.999664
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011785
(v1.0)
Lrrc1774511
Maternal RNA0.98812
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011729
(v2.0)
Lrrc1774511
583/474-0.2137437/474-0.232914/474-1.417383/474-1.1728202/4740.82181228/4740.7727
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011729
(v2.0)
Lrrc1774511
244/217-0.3419178/217-0.39998/217-1.069123/217-1.8619117/2171.1515689/2171.064
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011729
(v2.0)
Lrrc1774511
84.44818895.96
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011729
(v2.0)
Lrrc1774511
42.10614495.7
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011785
(v1.0)
Lrrc17NM_02897774511
208.1438.937612.17623.511171.87505
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011785
(v1.0)
Lrrc17FR073510,NM_02897774511
253.30743.346913.79664.269482.23826
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011785
(v1.0)
Lrrc17NM_02897774511
217.630.29394742.4818
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011785
(v1.0)
Lrrc17NM_02897774511
212.42838.546636.6591
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011785
(v1.0)
Lrrc17FR073510,NM_02897774511
44.017742.5023
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011785
(v1.0)
Lrrc17NM_02897774511
217.7560.28992140.2065
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011785
(v1.0)
Lrrc17NM_02897774511
11.27323.390178.73421
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011785
(v1.0)
Lrrc17FR073510,NM_02897774511
4.2234410.5328
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011785
(v1.0)
Lrrc17NM_02897774511
58.552617.6401
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011785
(v1.0)
Lrrc17NM_02897774511
76.98576.96505
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011785
(v1.0)
11409H3114H08-3P37nb-pending74511
TC910371U,F,23.81983.47172.7332.38241.93432.14781.7706
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011785
(v1.0)
1429679_atMm.439963Lrrc17NM_028977.174511
1378.8251701.1445.62500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011785
(v1.0)
A_51_P301930Lrrc17BC03031774511
11P1.1650.369P
Proteome N/A