DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011823
GeneLrrc58
Synonyms
Desc.leucine rich repeat containing 58
LocusNM_177093 chr16:37868486-37888943(+)
DB links


Entrez 320184
MGI 2443542
Ensembl ENSMUSG00000034158
Vega OTTMUSG00000025723
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011766
(v2.0)
Lrrc58NM_177093320184
10.5696.0977911.420736.180567.43986.3904744.205412.331850.89566.44549
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011823
(v1.0)
Lrrc58320184
MGA0.99579
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011766
(v2.0)
Lrrc58320184
728/3950.3684449/3950.0685247/3952.8859494/3951.647762/395-0.6058471/395-0.3445
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011766
(v2.0)
Lrrc58320184
428/1570.9297261/1570.6139235/1574.0817467/1572.884122/157-0.751122/157-0.9546
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011766
(v2.0)
Lrrc58320184
53.460411745.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011766
(v2.0)
Lrrc58320184
11.56987216.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
6.338257.8959926.911846.689630.9769
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
7.291938.9628220.59737.436254.9943
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
6.627223.865198.6147
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
6.468827.816719.13254
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
9.1021410.6702
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
6.631073.8122510.0163
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
24.916245.080635.1326
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
37.032428.9916
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011823
(v1.0)
Lrrc58NM_177093320184
4.5176454.6291
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011823
(v1.0)
Lrrc58NM_177093320184
0.8486331.13975
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011823
(v1.0)
1427131_s_atMm.390882Lrrc58NM_177093.3320184
00111.025319.55185.075
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011823
(v1.0)
A_51_P188381C330018J07RikNM_177093320184
11P0.4270.113P
Proteome N/A