DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011835
GeneLrrc8b
SynonymsR75581
Desc.leucine rich repeat containing 8 family, member B
LocusNM_001033550 chr5:105844794-105915208(+)
DB links


Entrez 433926
MGI 2141353
Ensembl ENSMUSG00000070639
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011781
(v2.0)
Lrrc8bNM_001033550433926
787.502113.996104.79646.694112.79122.4843610.5281110.68914.24781.00289
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011835
(v1.0)
Lrrc8b433926
Maternal RNA0.94753
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011781
(v2.0)
Lrrc8b433926
671/4170.1731481/4170.0896718/4174.34562157/4173.6942175/4170.799993/4170.6511
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011781
(v2.0)
Lrrc8b433926
371/1850.4888280/1850.4795601/1855.21171631/1854.452865/1850.5387370/1850.3988
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011781
(v2.0)
Lrrc8b433926
76.363513556.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011781
(v2.0)
Lrrc8b433926
21.58887628.41
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
118.5572.555534.74048.838387.51587
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
203.679106.43459.454615.384814.5392
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
123.955287.99779.1596
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
120.99271.826981.9718
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
79.901192.1851
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
124.027284.05389.9039
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
32.16428.533819.96438
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
10.012311.6556
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011835
(v1.0)
Lrrc8bNM_001033550433926
43.290215.1745
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011835
(v1.0)
Lrrc8bNM_001033550433926
5.47592.96873
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A