DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011838
GeneLrrc8e
SynonymsC87354
Desc.leucine rich repeat containing 8 family, member E
LocusNM_028175 chr8:4226827-4237470(+)
DB links


Entrez 72267
MGI 1919517
Ensembl ENSMUSG00000046589
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011784
(v2.0)
Lrrc8eNM_02817572267
2.5508522.676722.89266.006855.396250.2333294.6408520.32697.519870.100613
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011838
(v1.0)
Lrrc8e72267
Maternal RNA0.97653
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011784
(v2.0)
Lrrc8e72267
749/5010.0672445/501-0.286669/5010.7272262/5010.3943406/5011.74612287/5011.5893
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011784
(v2.0)
Lrrc8e72267
358/2190.1954212/219-0.162355/2191.5558232/2191.4042243/2192.18661234/2191.8902
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011784
(v2.0)
Lrrc8e72267
54.8559060.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011784
(v2.0)
Lrrc8e72267
16.16124734.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
23.575815.88524.47313.751093.24629
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
103.56577.112413.544545.50933.76448
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
24.65070.93287317.3311
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
24.061515.725715.0772
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
17.684417.2366
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
24.6650.92009616.5361
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
4.14143.621835.23606
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
45.35152.1153
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011838
(v1.0)
Lrrc8eNM_02817572267
12.53591.62493
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011838
(v1.0)
Lrrc8eNM_02817572267
13.587517.1228
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011838
(v1.0)
1456008_atMm.25479Lrrc8eNM_028175.272267
666.525379.525298.77500
0011838
(v1.0)
1438445_atMm.25479Lrrc8eNM_028175.272267
532.4251224.225319.800
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011838
(v1.0)
A_52_P413058Lrrc8eNM_02817572267
11P0.8360.329P
0011838
(v1.0)
A_52_P655761Lrrc8eNM_02817572267
11P0.5510.106P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011838
(v1.0)
Lrrc8e72267
010010