DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011843
GeneLrrfip2
Synonyms
Desc.leucine rich repeat (in FLII) interacting protein 2
LocusNM_027742 chr9:111020615-111128172(+)
NM_001164838 chr9:111020615-111128172(+)
DB links


Entrez 71268
MGI 1918518
Ensembl ENSMUSG00000032497
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011789
(v2.0)
Lrrfip2NM_001164838,NM_02774271268
27.778699.669892.397612.965913.06143.114997.4409178.676816.49433.89142
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011843
(v1.0)
Lrrfip271268
Maternal RNA0.99991
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011789
(v2.0)
Lrrfip271268
638/3210.4769416/3210.2571124/3212.1869308/3211.265118/321-2.0393183/321-1.4027
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011789
(v2.0)
Lrrfip271268
397/1640.759231/1640.376122/1643.083295/1642.161211/164-1.75194/164-1.388
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011789
(v2.0)
Lrrfip271268
44.838515329.31
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011789
(v2.0)
Lrrfip271268
7.07251126.31
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
103.56564.22959.662679.066175.26327
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
421.658150.89619.335313.555513.7094
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
108.28710.158970.0757
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
105.69963.584558.3386
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
86.9568105.331
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
108.3510.019863.9838
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
8.946138.7537511.4256
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
23.279266.9836
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
99.10832.83982
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011843
(v1.0)
Lrrfip2NM_001164838,NM_02774271268
3.301663.01262
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011843
(v1.0)
16650K0440A08-3Mm.29797Lrrfip271268
U011079NAP122029-001Lrrfip2;TC831908Q9CU89U,F,22.96263.13052.85592.64192.64782.70262.7133
0011843
(v1.0)
20905L0818G11-3Lrrfip271268
U029572NAP095674-001TC9054973.98863.77234.05093.71863.61153.80893.6237
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011843
(v1.0)
1436510_a_atMm.302287Lrrfip2NM_001164838.1,NM_027742.371268
1799.475424.85586.225246.6375.975
0011843
(v1.0)
1436378_atMm.302287Lrrfip2NM_001164838.1,NM_027742.371268
922.275641.6708.400
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011843
(v1.0)
A_52_P287927Lrrfip2XM_28454171268
11P0.8430.359P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011843
(v1.0)
Lrrfip271268
300.67300.67