DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011867
GeneLsm12
Synonyms
Desc.LSM12 homolog (S. cerevisiae)
LocusNM_172947 chr11:102024803-102046570(-)
DB links


Entrez 268490
MGI 1919592
Ensembl ENSMUSG00000020922
Vega OTTMUSG00000002494
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011813
(v2.0)
Lsm12NM_172947268490
29.587214.868116.0889103.052277.83924.186675.320813.442197.14124.5499
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011867
(v1.0)
Lsm12268490
MGA0.99473
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011813
(v2.0)
Lsm12268490
596/3880.1062426/3880.0185431/3883.71161190/3882.9421/388-2.0981102/388-2.5093
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011813
(v2.0)
Lsm12268490
299/1540.4419209/1540.3225270/1544.307747/1543.58811/154-1.662545/154-2.3359
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011813
(v2.0)
Lsm12268490
39.018712930.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011813
(v2.0)
Lsm12268490
16.87046625.56
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
15.45411.106276.6253192.37453.5619
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
9.335926.9961638.9852113.21431.8968
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
16.158510.820312.1171
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
15.772310.99479.93274
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
7.104577.48488
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
16.167910.672110.8939
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
70.9431185.745136.2
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
111.99574.8651
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011867
(v1.0)
Lsm12NM_172947268490
2.9868643.2586
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011867
(v1.0)
Lsm12NM_172947268490
0.9223721.00472
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011867
(v1.0)
1427998_atMm.259079Lsm12NM_172947.3268490
103.9750136.3216.5750
0011867
(v1.0)
1429509_atMm.259079Lsm12NM_172947.3268490
00293.4597.85358.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0011867
(v1.0)
A_52_P4078712600001B17RikNM_172947268490
11P0.4460.104P
Proteome N/A