DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011924
GeneLyar
Synonyms
Desc.Ly1 antibody reactive clone
LocusNM_025281 chr5:38611721-38625545(+)
DB links


Entrez 17089
MGI 107470
Ensembl ENSMUSG00000067367
Vega OTTMUSG00000023311
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011872
(v2.0)
LyarNM_02528117089
31.879942.077916.3715148.309150.48554.793527.465426.0777123.43870.8158
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011924
(v1.0)
Lyar17089
Major ZGA0.98668
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011872
(v2.0)
Lyar17089
786/588-0.0939517/588-0.3013271/5882.4594628/5881.422418/588-2.9041163/588-2.4394
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011872
(v2.0)
Lyar17089
387/2320.2245231/232-0.1219250/2323.6411566/2322.60498/232-2.655983/232-2.0624
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011872
(v2.0)
Lyar17089
77.22914154.77
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011872
(v2.0)
Lyar17089
24.94578728.67
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011924
(v1.0)
LyarNM_02528117089
43.709311.3425110.222104.16519.7595
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011924
(v1.0)
LyarNM_02528117089
66.336821.3291164.882158.20733.2152
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011924
(v1.0)
LyarNM_02528117089
45.702111.658812.3749
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011924
(v1.0)
LyarNM_02528117089
44.609711.228619.3951
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011924
(v1.0)
LyarNM_02528117089
132.36183.9919
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011924
(v1.0)
LyarNM_02528117089
45.728611.499121.2719
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011924
(v1.0)
LyarNM_02528117089
102.049100.57585.34
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011924
(v1.0)
LyarNM_02528117089
165.567176.684
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011924
(v1.0)
LyarNM_02528117089
40.066399.9518
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011924
(v1.0)
LyarNM_02528117089
20.495940.3785
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011924
(v1.0)
10748H3103A10-3Mm.28560Lyar17089
U005527NAP010128-001Lyar;TC794206Q08288U,F3.37793.39814.29954.97124.14514.38853.9788
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011924
(v1.0)
1417511_atMm.28560LyarNM_025281.317089
676.475138.85999.051169.775632.225
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0011924
(v1.0)
Lyar17089
100300