DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0011941
GeneLyrm1
Synonyms
Desc.LYR motif containing 1
LocusNM_029610 chr7:127039806-127060264(+)
DB links


Entrez 73919
MGI 1921169
Ensembl ENSMUSG00000030922
Vega OTTMUSG00000025610
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011889
(v2.0)
Lyrm1NM_001285959,NM_001285960,NM_001285961,NM_029610,NR_10437773919
5.731879.123538.4792610.94646.741164.328771.550237.206025.191985.88175
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0011941
(v1.0)
Lyrm173919
Major ZGA0.94462
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011889
(v2.0)
Lyrm173919
800/4250.3989593/4250.3636853/4254.56722758/4254.021432/425-1.6432258/425-1.3144
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2011889
(v2.0)
Lyrm173919
417/1940.5887249/1940.2427779/1945.5212181/1944.804214/194-1.665986/194-1.7552
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011889
(v2.0)
Lyrm173919
46.793811739.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2011889
(v2.0)
Lyrm173919
17.7028520.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
6.420323.774325.642233.120180.708718
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
8.02134.504766.568463.685920.815985
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
6.713031.495154.11787
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
6.552583.736423.70422
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
4.574094.26366
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
6.716931.474674.06266
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
5.223823.012662.74647
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
3.646193.48549
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0011941
(v1.0)
Lyrm1NM_02961073919
1.9004718.9887
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0011941
(v1.0)
Lyrm1NM_02961073919
00.0503187
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0011941
(v1.0)
1431774_a_atMm.46381Lyrm1NM_029610.273919
65.52507461.735.575
Agilent44K N/A
Proteome N/A