DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012048
GeneMap1lc3a
SynonymsLC3
LC3a
Desc.microtubule-associated protein 1 light chain 3 alpha
LocusNM_025735 chr2:155102100-155103809(+)
NR_046364 chr2:155102100-155103809(+)
DB links


Entrez 66734
MGI 1915661
Ensembl ENSMUSG00000027602
Vega OTTMUSG00000016007
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012007
(v2.0)
Map1lc3aNM_025735,NR_04636466734
637.08850.151621.5352187.965437.12842.874741.293944.9573309.03748.0713
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012048
(v1.0)
Map1lc3a66734
MGA0.98858
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012007
(v2.0)
Map1lc3a66734
844/4590.3652524/4590.0747695/4594.1642070/4593.497243/459-1.3382291/459-1.2525
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012007
(v2.0)
Map1lc3a66734
447/1990.6521257/1990.2516563/1995.01861453/1994.182314/199-1.7018120/199-1.3182
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012007
(v2.0)
Map1lc3a66734
78.345814155.56
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012007
(v2.0)
Map1lc3a66734
16.74687522.33
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
57.613816.4454154.453335.69632.3426
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
83.900721.3095211.288473.07545.8443
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
60.2405257.34117.9423
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
58.800716.280336.8028
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
21.640648.7994
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
60.2755253.81740.3641
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
143324.128236.568
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
485.789350.619
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012048
(v1.0)
Map1lc3aNM_02573566734
79.565325.0886
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012048
(v1.0)
Map1lc3aNM_02573566734
1.64751.2751
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012048
(v1.0)
18794L0227G03-3Mm.1962394922501H04Rik66734
U002701NAP097158-0011010001H21Rik;4922501H04Rik;TC925725,TC925724,TC925717Q9DC74U,F,23.90143.76353.83024.36894.70164.47794.3036
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012048
(v1.0)
1451290_atMm.196239Map1lc3aNM_025735.266734
00189.575687.45134.325
0012048
(v1.0)
1447883_x_atMm.196239Map1lc3aNM_025735.266734
3190.5751246.955489.27517857.0756304.25
Agilent44K N/A
Proteome N/A