DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012112
GeneMarch6
Synonyms
Desc.membrane-associated ring finger (C3HC4) 6
LocusNM_172606 chr15:31385654-31460792(-)
DB links


Entrez 223455
MGI 2442773
Ensembl ENSMUSG00000039100
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012084
(v2.0)
March6NM_172606223455
12.877788.150313.51899.6618313.06026.422410.333812.642211.52995.83888
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012112
(v1.0)
March6223455
Maternal RNA0.9993
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012084
(v2.0)
March6223455
684/3740.3573456/3740.1694121/3741.9388320/3741.101178/374-0.2013581/3740.0361
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012084
(v2.0)
March6223455
367/1520.755222/1520.4279111/1523.0497292/1522.254417/152-1.0592124/152-0.885
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012084
(v2.0)
March6223455
43.627614230.72
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012084
(v2.0)
March6223455
8.23941047.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012112
(v1.0)
March6NM_172606223455
91.63449.341547.192099.080417.12699
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012112
(v1.0)
March6NM_172606223455
2558.36248.226234.186212.85262.6535
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012112
(v1.0)
March6NM_172606223455
95.81224.7095110.1918
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012112
(v1.0)
March6NM_172606223455
93.52219.247759.36338
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012112
(v1.0)
March6NM_172606223455
83.486364.4977
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012112
(v1.0)
March6NM_172606223455
95.86784.64510.2694
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012112
(v1.0)
March6NM_172606223455
6.658768.76758.0225
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012112
(v1.0)
March6NM_172606223455
152.174172.139
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012112
(v1.0)
March6NM_172606223455
44.415911.9578
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012112
(v1.0)
March6NM_172606223455
16.919230.6037
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012112
(v1.0)
18670L0221C01-3Mm.242363830408G03223455
U036062NAP001005-001TC881061U,F,23.75253.28872.88562.93372.84472.92332.9918
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012112
(v1.0)
1433834_atMm.272185March6NM_172606.2223455
709383.7750204.875227.45
0012112
(v1.0)
1445928_atMm.272185March6NM_172606.2223455
307.1343.975222.7750310.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012112
(v1.0)
A_51_P294970Mar-06NM_172606223455
11P0.8430.336P
0012112
(v1.0)
A_51_P324072Mar-06NM_172606223455
11P0.5760.114P
0012112
(v1.0)
A_52_P636394Mar-06NM_172606223455
11P0.6980.207P
Proteome N/A