DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012201
GeneMcm4
Synonyms19G
Cdc21
mCdc21
Mcmd4
Desc.minichromosome maintenance deficient 4 homolog (S. cerevisiae)
LocusNM_008565 chr16:15623990-15637493(-)
DB links


Entrez 17217
MGI 103199
Ensembl ENSMUSG00000022673
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012173
(v2.0)
Mcm4NM_00856517217
5.8021660.946848.05144.9816920.52865.997327.737731.320619.52761.3882
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012201
(v1.0)
Mcm417217
Maternal RNA0.96145
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012173
(v2.0)
Mcm417217
593/3900.0915379/390-0.1571173/3902.3925367/3901.238212/390-2.8644142/390-2.0453
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012173
(v2.0)
Mcm417217
334/2030.2046180/203-0.2881168/2033.2529358/2032.1368/203-2.466990/203-1.7558
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012173
(v2.0)
Mcm417217
67.543914845.64
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012173
(v2.0)
Mcm417217
30.875610928.33
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
63.355433.15173.70714.216419.5589
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
1026.13788.3328.4111299.571403.546
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
66.24392.1219136.1692
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
64.660632.818823.2228
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
858.499230.788
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
66.28242.0928525.47
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
3.4321113.726513.4893
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
93.4176130.062
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012201
(v1.0)
Mcm4NM_00856517217
81.35522.44229
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012201
(v1.0)
Mcm4NM_00856517217
54.227148.8129
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012201
(v1.0)
15584K0208G12-3Mm.1500Mcmd417217
U036823NAP095216-001Mcmd4;TC852753P49717U,F,23.96413.74933.28063.55733.20783.44263.2245
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012201
(v1.0)
1416214_atMm.472867Mcm417217
1087.5251611.325369.6581.65973.525
0012201
(v1.0)
1436708_x_atMm.472867Mcm417217
938.61246.1388.55520.775671.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012201
(v1.0)
A_51_P356762Mcm4NM_00856517217
11P0.7160.185P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012201
(v1.0)
Mcm417217
130140