DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012212
GeneMcph1
SynonymsBRIT1
Desc.microcephaly, primary autosomal recessive 1
LocusNM_173189 chr8:18595173-18803188(+)
DB links


Entrez 244329
MGI 2443308
Ensembl ENSMUSG00000039842
Vega OTTMUSG00000020492
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012184
(v2.0)
Mcph1NM_173189244329
1.8744450.430664.246649.806238.13894.580927.3326371.522833.643.61063
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012212
(v1.0)
Mcph1244329
Minor ZGA0.90002
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012184
(v2.0)
Mcph1244329
567/404-0.0238385/404-0.1852131/4041.9446263/4040.708536/404-1.4058288/404-1.0836
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012184
(v2.0)
Mcph1244329
302/1890.1625193/189-0.0855127/1892.9491240/1891.66295/189-2.950992/189-1.6221
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012184
(v2.0)
Mcph1244329
50.09779055.66
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012184
(v2.0)
Mcph1244329
12.91435025.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
52.418944.589437.082626.46335.12234
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
65.496450.244543.380631.76186.25064
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
54.80870.68550348.648
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
53.498844.141753.0763
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
51.016860.7029
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
54.84060.67611458.2123
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
34.332725.551323.281
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
31.418429.0569
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012212
(v1.0)
Mcph1NM_173189244329
38.763363.491
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012212
(v1.0)
Mcph1NM_173189244329
4.101186.44615
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012212
(v1.0)
1429911_atMm.235296Mcph1NM_173189.2244329
8211083.55874.475654.2560.775
0012212
(v1.0)
1439115_atMm.235296Mcph1NM_173189.2244329
397.7721.325382.925300.025173.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012212
(v1.0)
A_51_P477676Mcph1NM_173189244329
11P0.3920.0892P
Proteome N/A