DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012229
GeneMdh1
SynonymsMDH-s
Mor-2
Mor2
Desc.malate dehydrogenase 1, NAD (soluble)
LocusNM_008618 chr11:21456695-21471937(-)
DB links


Entrez 17449
MGI 97051
Ensembl ENSMUSG00000020321
Vega OTTMUSG00000005249
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   5 Terms
      Citrate cycle (TCA cycle) (mmu00020)
      Pyruvate metabolism (mmu00620)
      Glyoxylate and dicarboxylate metabolism (mmu00630)
      Metabolic pathways (mmu01100)
      Proximal tubule bicarbonate reclamation (mmu04964)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012203
(v2.0)
Mdh1NM_00861817449
103.69231.819635.49064.574235.9169974.577590.352222.68928.7560489.2298
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012229
(v1.0)
Mdh117449
Maternal RNA0.96414
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012203
(v2.0)
Mdh117449
625/3830.1932457/3830.1383114/3831.8204385/3831.333127/383-1.7317205/383-1.4942
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012203
(v2.0)
Mdh117449
295/1750.2393204/1750.1044105/1752.7811328/1752.22149/175-2.105457/175-2.188
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012203
(v2.0)
Mdh117449
45.755712636.31
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012203
(v2.0)
Mdh117449
10.46668712.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
33.060524.62143.399654.1051264.1808
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
63.712959.27145.340128.6618119.459
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
34.567837.921326.8625
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
33.741624.374216.8595
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
212.902202.219
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
34.587937.401918.4909
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
3.147553.963666.07824
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
17.455358.6272
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012229
(v1.0)
Mdh1NM_00861817449
11.43680.687362
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012229
(v1.0)
Mdh1NM_00861817449
75.203441.7262
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012229
(v1.0)
6445H3025C05-3Mm.3156Mor217449
U032561NAP005833-001Mor2;TC891428,TC891416P14152U,F,22.88022.93142.89742.57892.20262.42512.5838
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012229
(v1.0)
1448172_atMm.212703Mdh1NM_008618.317449
727.775955.625172.10899.2
0012229
(v1.0)
1436834_x_atMm.212703Mdh1NM_008618.317449
1357.751519.15432145.2751018.2
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0012229
(v1.0)
A_51_P218179Mdh1NM_00861817449
11P0.7250.215P
0012229
(v1.0)
A_52_P407796Mdh1NM_00861817449
11P0.6950.17P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012229
(v1.0)
Mdh117449
12119354061